RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 DUSP8Q13202 625 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 ODF1Q14990 250 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 UBE3CQ15386 1083 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 ABHD15Q6UXT9 468 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 FATE1Q969F0 183 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 C12orf65Q9H3J6 166 aaKnown RBP3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 MSL2Q9HCI7 577 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 DMRT3Q9NQL9 472 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 TUBD1Q9UJT1 453 aa3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 THRAP3Q9Y2W1 955 aaKnown RBP3.31□□□□□ -1.88
RPRD1A-204ENST00000585953 CDC14BO60729 498 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 S100BP04271 92 aaPredicted RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 JUNP05412 331 aaKnown RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 CCND1P24385 295 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 RIN1Q13671 783 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 MUM1L1Q5H9M0 696 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 KRT40Q6A162 431 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 ADGRE4PQ86SQ3 457 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 GPR135Q8IZ08 494 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 SHCBP1Q8NEM2 672 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 HOOK2Q96ED9 719 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 GNRHR2Q96P88 292 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 SSBP3Q9BWW4 388 aaPredicted RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 GREM2Q9H772 168 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 AGO3Q9H9G7 860 aaKnown RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 TLR9Q9NR96 1032 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 NPEPPSL1A6NEC2 478 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 GPR42O15529 346 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 NDUFS2O75306 463 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 SNUPNO95149 360 aaKnown RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 MCAMP43121 646 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 RECQLP46063 649 aaPredicted RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 WNT3AP56704 352 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 PPP3CAQ08209 521 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 C19orf54Q5BKX5 351 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 EFCAB2Q5VUJ9 269 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 LIMS2Q7Z4I7 341 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 TAX1BP1Q86VP1 789 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 PPM1NQ8N819 430 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 SNX33Q8WV41 574 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 RIN2Q8WYP3 895 aaPredicted RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 PLA2G12BQ9BX93 195 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 IL23AQ9NPF7 189 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 AASDHPPTQ9NRN7 309 aa3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 LUC7L2Q9Y383 392 aaKnown RBP3.3□□□□□ -1.88
RPRD1A-204ENST00000585953 ZRANB2O95218 330 aaKnown RBP eCLIP3.29□□□□□ -1.888e-11■■■□□ 17.7
RPRD1A-204ENST00000585953 EPHB1P54762 984 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 PIN1Q13526 163 aaPredicted RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 MST1LQ2TV78 715 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 TMEM240Q5SV17 173 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 TCTN3Q6NUS6 607 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 GLB1LQ6UWU2 654 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 RAVER1Q8IY67 606 aaKnown RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 GPR156Q8NFN8 814 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 HOXB13Q92826 284 aaPredicted RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 RBM15Q96T37 977 aaKnown RBP eCLIP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 BDH2Q9BUT1 245 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 ADI1Q9BV57 179 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 RBM12Q9NTZ6 932 aaKnown RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 ZBTB21Q9ULJ3 1066 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 RPTORQ8N122 1335 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 MRC2Q9UBG0 1479 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 A0A1W2PRX2 142 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 NRP1O14786 923 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 AKR1B10O60218 316 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 ABLIM3O94929 683 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 ITGB3P05106 788 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 MGAT2Q10469 447 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 CIR1Q86X95 450 aaPredicted RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 CMTR2Q8IYT2 770 aaKnown RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 CMTM4Q8IZR5 234 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 LTBP4Q8N2S1 1624 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 CPA6Q8N4T0 437 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 LILRA3Q8N6C8 439 aaPredicted RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 GIMAP8Q8ND71 665 aaPredicted RBP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 ZNF480Q8WV37 535 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 OR14A2Q96R54 314 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 RCAN3Q9UKA8 241 aa3.29□□□□□ -1.88
RPRD1A-204ENST00000585953 UBE2QL1A1L167 161 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 OVOL3O00110 214 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 AKAP10O43572 662 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 FOXS1O43638 330 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 AKAP8O43823 692 aaKnown RBP3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 PHF2O75151 1096 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 RPS19P39019 145 aaKnown RBP3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 RAB27AP51159 221 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 DUSP2Q05923 314 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 Q6ZVL8 140 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 THEMISQ8N1K5 641 aaPredicted RBP3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 OR2I1PQ8NGU4 316 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 NRG4Q8WWG1 115 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 JDP2Q8WYK2 163 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 RTFDC1Q9BY42 306 aaPredicted RBP3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 ENKD1Q9H0I2 346 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 NELFAQ9H3P2 528 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 TCF7L1Q9HCS4 588 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 KLHL42Q9P2K6 505 aa3.28□□□□□ -1.88
RPRD1A-204ENST00000585953 NCDNQ9UBB6 729 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms