RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 PLA2G4AP47712 749 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 GABPB1Q06547 395 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 NEDD9Q14511 834 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 ANO5Q75V66 913 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 BTBD6Q96KE9 485 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 C11orf70Q9BRQ4 267 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 THAP2Q9H0W7 228 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 MTUS1Q9ULD2 1270 aa13.42□□□□□ -0.26
SMARCA4-208ENST00000585799 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 GOLGA8SH3BPF8 625 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 ZBTB22O15209 634 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 CYP2C8P10632 490 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 HOXD13P35453 343 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 KAZNQ674X7 775 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 FAM76AQ8TAV0 307 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 AFAP1L1Q8TED9 768 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 PLVAPQ9BX97 442 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 SPATC1LQ9H0A9 340 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 ASIC3Q9UHC3 531 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 F8VZ95 297 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 DDX3XO00571 662 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 OPA1O60313 960 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 SASH3O75995 380 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 CDK17Q00537 523 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 PAPD7Q5XG87 772 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 SEPT1Q8WYJ6 367 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 TLR10Q9BXR5 811 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 TELO2Q9Y4R8 837 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 CEP83Q9Y592 693 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 BUB1BO60566 1050 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 MAPK4P31152 587 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 COBLL1Q53SF7 1204 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 GJC2Q5T442 439 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 LIN9Q5TKA1 542 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 ANKRD13AQ8IZ07 590 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 SLC17A8Q8NDX2 589 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 PSPC1Q8WXF1 523 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 TATDN2Q93075 761 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 FAM204AQ9H8W3 233 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 RAB20Q9NX57 234 aa13.41□□□□□ -0.26
SMARCA4-208ENST00000585799 MYO1FO00160 1098 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 RNF40O75150 1001 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 TRIP13Q15645 432 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 CEP85LQ5SZL2 805 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 DAW1Q8N136 415 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 CPA5Q8WXQ8 436 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 COPS5Q92905 334 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 MRRFQ96E11 262 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 OATP04181 439 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 ADRB2P07550 413 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 MAPK6Q16659 721 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 SESTD1Q86VW0 696 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 TMEM117Q9H0C3 514 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 ASCC2Q9H1I8 757 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 DNAJC17Q9NVM6 304 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 TAS2R14Q9NYV8 317 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 AIPL1Q9NZN9 384 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 CWC15Q9P013 229 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 AJAP1Q9UKB5 411 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 GRID2IPA4D2P6 1211 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 ZNF862O60290 1169 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 RFFLQ8WZ73 363 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 SYN2Q92777 582 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 HEMGNQ9BXL5 484 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 TSPYL1Q9H0U9 437 aa13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-208ENST00000585799 DDX60LQ5H9U9 1706 aaKnown RBP13.4□□□□□ -0.27
SMARCA4-208ENST00000585799 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 PLTPP55058 493 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 GPC5P78333 572 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 ZNF568Q3ZCX4 644 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 OPTNQ96CV9 577 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 NUP85Q9BW27 656 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 FUT8Q9BYC5 575 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 EFCC1Q9HA90 598 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 CLCN3P51790 818 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 LACTBP83111 547 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 SV2AQ7L0J3 742 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms