RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ACTR2P61160 394 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 DR1Q01658 176 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 SUPT20HL1Q3ZLR7 823 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 KRT39Q6A163 491 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-217ENST00000584582 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 GANQ9H2C0 597 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ALG6Q9Y672 507 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ABCA3Q99758 1704 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 PAPPAQ13219 1627 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ACSL3O95573 720 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 CIITAP33076 1130 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 HOXD13P35453 343 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 JAK3P52333 1124 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ZNF365Q70YC5 407 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 TSEN2Q8NCE0 465 aaKnown RBP12.16□□□□□ -0.46
TOP3A-217ENST00000584582 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 RFFLQ8WZ73 363 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 EXOC4Q96A65 974 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 LRRC45Q96CN5 670 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ZBTB10Q96DT7 871 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 PXMP2Q9NR77 195 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 RNF19AQ9NV58 838 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 TELO2Q9Y4R8 837 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 GGPS1O95749 300 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 VIMP08670 466 aaKnown RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 ADCY8P40145 1251 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 FBXL13Q8NEE6 735 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 CASKIN2Q8WXE0 1202 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 ZIM3Q96PE6 472 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 ATP6V0A4Q9HBG4 840 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 ZNF302Q9NR11 478 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 OLFML3Q9NRN5 406 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 AGTPBP1Q9UPW5 1226 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 BTAF1O14981 1849 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 GOLGA6L7A0A1B0GV03 622 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 DKC1O60832 514 aaKnown RBP eCLIP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 GJB6O95452 261 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 IVLP07476 585 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 CYP2C19P33261 490 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 GPC5P78333 572 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 KCTD2Q14681 263 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 UAP1Q16222 522 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 CCDC38Q502W7 563 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 SYCP2LQ5T4T6 812 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 IRF2BP2Q7Z5L9 587 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 USP38Q8NB14 1042 aa12.15□□□□□ -0.46
TOP3A-217ENST00000584582 ZNF564Q8TBZ8 553 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.465e-7■■■□□ 17.1
TOP3A-217ENST00000584582 MOV10L1Q9BXT6 1211 aaKnown RBP12.15□□□□□ -0.46
TOP3A-217ENST00000584582 CLDN3O15551 220 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 COMTP21964 271 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 SGO2Q562F6 1265 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 SESTD1Q86VW0 696 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 RNF149Q8NC42 400 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 TRAPPC12Q8WVT3 735 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 NAP1L3Q99457 506 aaPredicted RBP12.15□□□□□ -0.47
TOP3A-217ENST00000584582 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 RBAKQ9NYW8 714 aaPredicted RBP12.15□□□□□ -0.47
TOP3A-217ENST00000584582 AGO2Q9UKV8 859 aaKnown RBP12.15□□□□□ -0.47
TOP3A-217ENST00000584582 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.47
TOP3A-217ENST00000584582 TBX20Q9UMR3 447 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.47
TOP3A-217ENST00000584582 ANKRD62A6NC57 917 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 TRIM66O15016 1216 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 CCNE2O96020 404 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 PPP2R5CQ13362 524 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 PBKQ96KB5 322 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 ADM5C9JUS6 153 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 SLC16A3O15427 465 aaKnown RBP12.14□□□□□ -0.47
TOP3A-217ENST00000584582 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
TOP3A-217ENST00000584582 FAM83AQ86UY5 434 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 CCDC60Q8IWA6 550 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-217ENST00000584582 FMO2Q99518 471 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-217ENST00000584582 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 PLIN4Q96Q06 1357 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 CYP3A4P08684 503 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 WEE2P0C1S8 567 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 MARCKSL1P49006 195 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 FAM182AQ5T1J6 154 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 DENND2CQ68D51 928 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 EMBQ6PCB8 327 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 SCYL3Q8IZE3 742 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
TOP3A-217ENST00000584582 MRIQ9BWK5 157 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms