RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ITGA4P13612 1032 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 CDC25AP30304 524 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 LONP1P36776 959 aaKnown RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 DSC1Q08554 894 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 GIT2Q14161 759 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 DUSP6Q16828 381 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 TMEM119Q4V9L6 283 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 RINT1Q6NUQ1 792 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 DDX53Q86TM3 631 aaKnown RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 DAW1Q8N136 415 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 SYT2Q8N9I0 419 aaPredicted RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 BSNDQ8WZ55 320 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 TMEM169Q96HH4 297 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 IGSF21Q96ID5 467 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 CPB2Q96IY4 423 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 MSLNLQ96KJ4 702 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 TRIM6Q9C030 488 aaPredicted RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 ZSCAN16Q9H4T2 348 aaPredicted RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 CLDND1Q9NY35 253 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 PRKAG3Q9UGI9 489 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 RBM19Q9Y4C8 960 aaKnown RBP10.93□□□□□ -0.66
SKA2-208ENST00000583927 VWA8A3KMH1 1905 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 MYO10Q9HD67 2058 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 ANK1P16157 1881 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ARL5CA6NH57 179 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ZC3H11AO75152 810 aaKnown RBP eCLIP10.92□□□□□ -0.66
SKA2-208ENST00000583927 TBX10O75333 385 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ALDH2P05091 517 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 PRKCBP05771 671 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 SCP2P22307 547 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 SLC12A3P55017 1021 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 RNASELQ05823 741 aaKnown RBP10.92□□□□□ -0.66
SKA2-208ENST00000583927 COASYQ13057 564 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 SMC1AQ14683 1233 aaKnown RBP10.92□□□□□ -0.66
SKA2-208ENST00000583927 SF3A1Q15459 793 aaKnown RBP10.92□□□□□ -0.66
SKA2-208ENST00000583927 SMAD2Q15796 467 aaKnown RBP10.92□□□□□ -0.66
SKA2-208ENST00000583927 PTCRAQ6ISU1 281 aaPredicted RBP10.92□□□□□ -0.66
SKA2-208ENST00000583927 MAEAQ7L5Y9 396 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 KCNK18Q7Z418 384 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ADGRD2Q7Z7M1 963 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 SPIRE2Q8WWL2 714 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 PNMA5Q96PV4 448 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 TCF25Q9BQ70 676 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ADPGKQ9BRR6 497 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ZBP1Q9H171 429 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 TLE6Q9H808 572 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 ARHGAP28Q9P2N2 729 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 C2orf16Q68DN1 1984 aa10.92□□□□□ -0.66
SKA2-208ENST00000583927 PLXNA3P51805 1871 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 DENND4AQ7Z401 1863 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 VPS37CA5D8V6 355 aaPredicted RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 B4GALT5O43286 388 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 HIP1RO75146 1068 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 DDHD2O94830 711 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 GLP2RO95838 553 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 EFEMP2O95967 443 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 CTSAP10619 480 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 GTF2F1P35269 517 aaKnown RBP eCLIP10.91□□□□□ -0.661e-8■■■■■ 31.9
SKA2-208ENST00000583927 PBX3P40426 434 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 UBA7P41226 1012 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 NPTX2P47972 431 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 NRIP1P48552 1158 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 AFF1P51825 1210 aaKnown RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 DLX2Q07687 328 aaPredicted RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 RESTQ13127 1097 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 MAPK7Q13164 816 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 DMP1Q13316 513 aaPredicted RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 SMAD4Q13485 552 aaKnown RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 PRPF4BQ13523 1007 aaKnown RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 PTPAQ15257 358 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 DCAF4L1Q3SXM0 396 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 CABP7Q86V35 215 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 ZNF280BQ86YH2 543 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 COLGALT2Q8IYK4 626 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 GPR65Q8IYL9 337 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 MRPL43Q8N983 215 aaKnown RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 SMRP1Q8NCR6 262 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 GSTCDQ8NEC7 633 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 DEPTORQ8TB45 409 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 MICAL1Q8TDZ2 1067 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 FAM193BQ96PV7 902 aaPredicted RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 NXF3Q9H4D5 531 aaKnown RBP10.91□□□□□ -0.66
SKA2-208ENST00000583927 PDZD7Q9H5P4 517 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 ENTPD7Q9NQZ7 604 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 CLEC1BQ9P126 229 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 DNAJB4Q9UDY4 337 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 ODF2LQ9ULJ1 636 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 MTMR6Q9Y217 621 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 INPP5FQ9Y2H2 1132 aa10.91□□□□□ -0.66
SKA2-208ENST00000583927 C2orf71A6NGG8 1288 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 H3BQ06 376 aaPredicted RBP10.9□□□□□ -0.66
SKA2-208ENST00000583927 K7ERI5 159 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms