RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 AP3B2Q13367 1082 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 TDGQ13569 410 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 COL9A3Q14050 684 aaPredicted RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 GIT2Q14161 759 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 NECTIN1Q15223 517 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 CLLU1OSQ5K130 101 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 RARS2Q5T160 578 aaKnown RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 ZNF746Q6NUN9 644 aaPredicted RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 SYNE3Q6ZMZ3 975 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 FRMD5Q7Z6J6 570 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 DDX53Q86TM3 631 aaKnown RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 SGMS1Q86VZ5 419 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 PLA2G4DQ86XP0 818 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 RAB11FIP4Q86YS3 637 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 SMAP1Q8IYB5 467 aaPredicted RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 ADSSL1Q8N142 457 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 VPS52Q8N1B4 723 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 TDRD5Q8NAT2 981 aaKnown RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 RNF169Q8NCN4 708 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 FLCNQ8NFG4 579 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 SLC22A17Q8WUG5 538 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 CRYGNQ8WXF5 182 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 TMEM169Q96HH4 297 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 ARID3AQ99856 593 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 ZNF577Q9BSK1 485 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 GLT8D2Q9H1C3 349 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 NRBP2Q9NSY0 501 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 DZANK1Q9NVP4 752 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 GABBR1Q9UBS5 961 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 DBR1Q9UK59 544 aaKnown RBP6.03□□□□□ -1.44
VAPA-207ENST00000583879 PCDHA10Q9Y5I2 948 aa6.03□□□□□ -1.44
VAPA-207ENST00000583879 CFAP54Q96N23 3096 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 IGLV3-22A0A075B6J6 115 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CARNS1A5YM72 827 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 hCG_1984214I3L0E3 225 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 SLC27A2O14975 620 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 AP1G2O75843 785 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 PSAPP07602 524 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 GALTP07902 379 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CTSAP10619 480 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 DARSP14868 501 aaKnown RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 EPCAMP16422 314 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CA8P35219 290 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 GPC3P51654 580 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 POLGP54098 1239 aaPredicted RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 TMEM259Q4ZIN3 620 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 JAKMIP3Q5VZ66 844 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CWF19L1Q69YN2 538 aaKnown RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 OTOP3Q7RTS5 596 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 GPR149Q86SP6 731 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 PPFIBP1Q86W92 1011 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 MICU3Q86XE3 530 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CCDC105Q8IYK2 499 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 LRRC71Q8N4P6 559 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 LINC01465Q8N7H1 131 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 ZNF713Q8N859 430 aaPredicted RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 HELQQ8TDG4 1101 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 RSPH1Q8WYR4 309 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 ACSF2Q96CM8 615 aaPredicted RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 IGSF21Q96ID5 467 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 MAP7D2Q96T17 732 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 RTP3Q9BQQ7 232 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 TRAIPQ9BWF2 469 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 MRPL9Q9BYD2 267 aaKnown RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 LRRC2Q9BYS8 371 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 ZBP1Q9H171 429 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 KCNK12Q9HB15 430 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CHST12Q9NRB3 414 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 ENAMQ9NRM1 1142 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 RBM28Q9NW13 759 aaKnown RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 BARHL2Q9NY43 387 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 DACT1Q9NYF0 836 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 CDV3Q9UKY7 258 aaKnown RBP6.02□□□□□ -1.45
VAPA-207ENST00000583879 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 SAMM50Q9Y512 469 aa6.02□□□□□ -1.45
VAPA-207ENST00000583879 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 ZNF862O60290 1169 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 ALDH2P05091 517 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 SKIP12755 728 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 FGFR4P22455 802 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 RFC5P40937 340 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 CTSOP43234 321 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 PHKA2P46019 1235 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 CDC42EP1Q00587 391 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 RELBQ01201 579 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 ANGPT1Q15389 498 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 CREB3L3Q68CJ9 461 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 APOA5Q6Q788 366 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 LYPD4Q6UWN0 246 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 TMC5Q6UXY8 1006 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 CCDC149Q6ZUS6 474 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 CABP7Q86V35 215 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 TMEM173Q86WV6 379 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 DTWD2Q8NBA8 298 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 FEZF2Q8TBJ5 459 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 AUTS2Q8WXX7 1259 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 ZNF668Q96K58 619 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 FAM167AQ96KS9 214 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms