RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 CELA2BP08218 269 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 TGFB3P10600 412 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 ACPPP15309 386 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 CD52P31358 61 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 TCF7P36402 384 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 BMPR1AP36894 532 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 TMEM62Q0P6H9 643 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 IMMTQ16891 758 aaKnown RBP9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 EP400NLQ6ZTU2 488 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 SRBD1Q8N5C6 995 aaKnown RBP9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 GALNT6Q8NCL4 622 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 CYP2W1Q8TAV3 490 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 GIPC2Q8TF65 315 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 DNAJB3Q8WWF6 145 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 UIMC1Q96RL1 719 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 UBAC1Q9BSL1 405 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 LY9Q9HBG7 655 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 NPHS2Q9NP85 383 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 CDY2AQ9Y6F7 541 aa9.06□□□□□ -0.96
PPP4R1-225ENST00000583438 FIBPO43427 364 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 OIP5O43482 229 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 CAND2O75155 1236 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 MMP1P03956 469 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 CPB1P15086 417 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 TCF15Q12870 199 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 ADAM15Q13444 863 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 GRIK4Q16099 956 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 PAN2Q504Q3 1202 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 HERC4Q5GLZ8 1057 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 PEAR1Q5VY43 1037 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 PCNX4Q63HM2 1172 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 FAM35AQ86V20 835 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 FIBCD1Q8N539 461 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 CEP120Q8N960 986 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 SPPL3Q8TCT6 385 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 TMEM40Q8WWA1 233 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 IL17RAQ96F46 866 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 PGBD1Q96JS3 809 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 KRT23Q9C075 422 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 MAP3K20Q9NYL2 800 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 BARX2Q9UMQ3 279 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 PLAGL2Q9UPG8 496 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 UBIAD1Q9Y5Z9 338 aa9.05□□□□□ -0.96
PPP4R1-225ENST00000583438 SHISA8B8ZZ34 492 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 NOP56O00567 594 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 IFIT3O14879 490 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 PDGFBP01127 241 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 CHMLP26374 656 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 VCPP55072 806 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 PPFIA1Q13136 1202 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 ITGB3BPQ13352 177 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 PCSK7Q16549 785 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 PTPROQ16827 1216 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 TMEM266Q2M3C6 531 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 CCDC178Q5BJE1 867 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 ZNF385CQ66K41 422 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 KCNV1Q6PIU1 500 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 SKAP1Q86WV1 359 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 SAMD11Q96NU1 681 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 SPZ1Q9BXG8 430 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 USP26Q9BXU7 913 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 FAM49AQ9H0Q0 323 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 SMOC2Q9H3U7 446 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 TUBE1Q9UJT0 475 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 WDR87Q6ZQQ6 2873 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 ZFHX2Q9C0A1 2572 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 DOCK6Q96HP0 2047 aa9.04□□□□□ -0.96
PPP4R1-225ENST00000583438 ARID2Q68CP9 1835 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 LOC730098B7Z3J9 87 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 WIPF1O43516 503 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 PRPF40AO75400 957 aaKnown RBP9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 EYA4O95677 639 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 CCNE2O96020 404 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 ALADP13716 330 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 ZNF16P17020 682 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 IGBP1P78318 339 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 MRPS6P82932 125 aaKnown RBP9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 ATP11AP98196 1134 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 SMAD4Q13485 552 aaKnown RBP9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 KCNC3Q14003 757 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 NEDD9Q14511 834 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 WTAPQ15007 396 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 PERM1Q5SV97 790 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 ALG1LQ6GMV1 187 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 TSHZ1Q6ZSZ6 1077 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 SMRP1Q8NCR6 262 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 ASIC4Q96FT7 647 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 SENP7Q9BQF6 1050 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 LRRC2Q9BYS8 371 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 FAM86C1Q9NVL1 165 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 PRKAG3Q9UGI9 489 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms