RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 WDR6Q9NNW5 1121 aaKnown RBP15.15■□□□□ 0.02
SS18-222ENST00000582792 WRAP73Q9P2S5 460 aaPredicted RBP15.15■□□□□ 0.02
SS18-222ENST00000582792 WNT16Q9UBV4 365 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 DPP7Q9UHL4 492 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 PRG3Q9Y2Y8 225 aaPredicted RBP15.15■□□□□ 0.02
SS18-222ENST00000582792 CACNA1AO00555 2505 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 CCDC195A0A1B0GUA6 201 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 INPPL1O15357 1258 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 GAS2O43903 313 aaKnown RBP15.14■□□□□ 0.01
SS18-222ENST00000582792 GLUD1P00367 558 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 P4HBP07237 508 aaKnown RBP15.14■□□□□ 0.01
SS18-222ENST00000582792 ITGA4P13612 1032 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 OR1G1P47890 313 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 GLUD2P49448 558 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 ANAPC15P60006 121 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 TOB2Q14106 344 aaPredicted RBP15.14■□□□□ 0.01
SS18-222ENST00000582792 INF2Q27J81 1249 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 ERMP1Q7Z2K6 904 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 KRT25Q7Z3Z0 450 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 SMG8Q8ND04 991 aaKnown RBP15.14■□□□□ 0.01
SS18-222ENST00000582792 STAMQ92783 540 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 FAM20AQ96MK3 541 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 RXFP1Q9HBX9 757 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 KCNMB3Q9NPA1 279 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 EPS15L1Q9UBC2 864 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 CLUHO75153 1309 aa15.14■□□□□ 0.01
SS18-222ENST00000582792 KRBA1A5PL33 1030 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 CPLX1O14810 134 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 ASAP2O43150 1006 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 PAPLNO95428 1278 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 CFHP08603 1231 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 GBP2P32456 591 aaPredicted RBP15.13■□□□□ 0.01
SS18-222ENST00000582792 ID4P47928 161 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 DSC1Q08554 894 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 KIAA0319Q5VV43 1072 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 PPP4R3AQ6IN85 833 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 C4orf19Q8IY42 314 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 RNF149Q8NC42 400 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 HDAC7Q8WUI4 952 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 TCP11Q8WWU5 503 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 RSAD2Q8WXG1 361 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 AIFM3Q96NN9 605 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
SS18-222ENST00000582792 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
SS18-222ENST00000582792 IPPQ9Y573 584 aa15.13■□□□□ 0.01
SS18-222ENST00000582792 ARL5CA6NH57 179 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 RFPL2O75678 378 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 ERLIN2O94905 339 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 C1RP00736 705 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 AXLP30530 894 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
SS18-222ENST00000582792 MLH1P40692 756 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 DSG1Q02413 1049 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 EMC2Q15006 297 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 PCBP1Q15365 356 aaKnown RBP eCLIP15.12■□□□□ 0.01
SS18-222ENST00000582792 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 NEK8Q86SG6 692 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 SLC44A3Q8N4M1 653 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 SMG7Q92540 1137 aaKnown RBP15.12■□□□□ 0.01
SS18-222ENST00000582792 NXPE3Q969Y0 559 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 ZNF707Q96C28 371 aaPredicted RBP15.12■□□□□ 0.01
SS18-222ENST00000582792 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 ZNF274Q96GC6 653 aaPredicted RBP15.12■□□□□ 0.01
SS18-222ENST00000582792 MYADMQ96S97 322 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 GAD1Q99259 594 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 LXNQ9BS40 222 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 EIF2AQ9BY44 585 aaKnown RBP15.12■□□□□ 0.01
SS18-222ENST00000582792 TM6SF1Q9BZW5 370 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 ARID2Q68CP9 1835 aa15.12■□□□□ 0.01
SS18-222ENST00000582792 EP300Q09472 2414 aaPredicted RBP15.11■□□□□ 0.01
SS18-222ENST00000582792 F8W810 466 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 STK25O00506 426 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 TBX3O15119 743 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 TSPAN1O60635 241 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 MYBP10242 640 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 SRFP11831 508 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 GCFC2P16383 781 aaKnown RBP15.11■□□□□ 0.01
SS18-222ENST00000582792 SCNN1GP51170 649 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 EPHA7Q15375 998 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 NOTUMQ6P988 496 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 CPLX2Q6PUV4 134 aaKnown RBP15.11■□□□□ 0.01
SS18-222ENST00000582792 HAS1Q92839 578 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 MTRQ99707 1265 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 SEMA4AQ9H3S1 761 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 PLEKHA4Q9H4M7 779 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 ZSWIM6Q9HCJ5 1215 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 MIOSQ9NXC5 875 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 KCNJ14Q9UNX9 436 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 DOCK8Q8NF50 2099 aa15.11■□□□□ 0.01
SS18-222ENST00000582792 TDRD15B5MCY1 1934 aaKnown RBP15.11■□□□□ 0.01
SS18-222ENST00000582792 MTCL1Q9Y4B5 1905 aaKnown RBP15.1■□□□□ 0.01
SS18-222ENST00000582792 CCDC194A0A1B0GVG4 234 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 NR1I2O75469 434 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 SEC24BO95487 1268 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 RFX1P22670 979 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms