RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TEX101Q9BY14 249 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 OXSMQ9NWU1 459 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 TRPM5Q9NZQ8 1165 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 PPP1R1BQ9UD71 204 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 PIPSLA2A3N6 862 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 OPA1O60313 960 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 PFKMP08237 780 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 GTF2F1P35269 517 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 RANGAP1P46060 587 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 GZMKP49863 264 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 USP14P54578 494 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 PAPD7Q5XG87 772 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 FBXO42Q6P3S6 717 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 OR5M3Q8NGP4 307 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 FAM193BQ96PV7 902 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 H2AFY2Q9P0M6 372 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 PCDHB6Q9Y5E3 794 aa5.26□□□□□ -1.57
SMCHD1-206ENST00000581631 A0A1W2PR48 441 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 DIRC3C9JPN6 131 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 PCDH8O95206 1070 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 APOL3O95236 402 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 ATP2A2P16615 1042 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 SDSP20132 328 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 LRRC32Q14392 662 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 METRNLQ641Q3 311 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 CDCA2Q69YH5 1023 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 DRICH1Q6PGQ1 229 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 XYLT1Q86Y38 959 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 PLXDC1Q8IUK5 500 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 ZZZ3Q8IYH5 903 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 CDYL2Q8N8U2 506 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 SIMC1Q8NDZ2 872 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 SUPT20HQ8NEM7 779 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 TOMM22Q9NS69 142 aa5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-206ENST00000581631 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-206ENST00000581631 NDUFA10O95299 355 aa5.24□□□□□ -1.57
SMCHD1-206ENST00000581631 AVPR1BP47901 424 aa5.24□□□□□ -1.57
SMCHD1-206ENST00000581631 RNASE9P60153 205 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-206ENST00000581631 FAM83GA6ND36 823 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 JMJD7P0C870 316 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 EGR2P11161 476 aaPredicted RBP5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 PTH2RP49190 550 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 KRTAP10-9P60411 292 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 NHLH2Q02577 135 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 SCAPQ12770 1279 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 SQSTM1Q13501 440 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 PDCD4Q53EL6 469 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 CMTR2Q8IYT2 770 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 LCORLQ8N3X6 602 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 CPEB3Q8NE35 698 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 ASB10Q8WXI3 467 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 C8orf37Q96NL8 207 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 INSL6Q9Y581 213 aa5.23□□□□□ -1.57
SMCHD1-206ENST00000581631 TGM5O43548 720 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 HKR1P10072 659 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 CD40P25942 277 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 GPR15P49685 360 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 DSG1Q02413 1049 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 DUSP2Q05923 314 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 TP53BP2Q13625 1128 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 CCDC178Q5BJE1 867 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 ANKS6Q68DC2 871 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 SLC41A1Q8IVJ1 513 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 EFHBQ8N7U6 833 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 ZNF496Q96IT1 587 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 NEU1Q99519 415 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 LRFN3Q9BTN0 628 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 EPC1Q9H2F5 836 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 USP36Q9P275 1121 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 TMPRSS11EQ9UL52 423 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 CLCA2Q9UQC9 943 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 FRMD4BQ9Y2L6 1034 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 SPATA31A6Q5VVP1 1343 aa5.22□□□□□ -1.57
SMCHD1-206ENST00000581631 UNC119BA6NIH7 251 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 PRR5-ARHGAP8B1AHC4 643 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 MPLP40238 635 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 GUCY1B3Q02153 619 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 FAM102AQ5T9C2 384 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 ABHD17BQ5VST6 288 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 LYSMD2Q8IV50 215 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 OR10H5Q8NGA6 315 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 HDAC5Q9UQL6 1122 aa5.21□□□□□ -1.58
SMCHD1-206ENST00000581631 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 ZMYM3Q14202 1370 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 RFPL3O75679 317 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 SPDEFO95238 335 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 ESRRBO95718 433 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 F2P00734 622 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 PLA2G5P39877 138 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 BLOC1S1P78537 153 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 ZNF362Q5T0B9 420 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 GPR158Q5T848 1215 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 ESPNLQ6ZVH7 1005 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 BOLLQ8N9W6 283 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 GAB3Q8WWW8 586 aa5.2□□□□□ -1.58
SMCHD1-206ENST00000581631 TMEM127O75204 238 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 CDK4P11802 303 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 HSP90B1P14625 803 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 DDX6P26196 483 aaKnown RBP eCLIP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms