RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 EIF2AQ9BY44 585 aaKnown RBP23.21■■□□□ 1.31
CCDC42-203ENST00000581598 GBP3Q9H0R5 595 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 TDRD15B5MCY1 1934 aaKnown RBP23.21■■□□□ 1.31
CCDC42-203ENST00000581598 ZMYM2Q9UBW7 1377 aa23.2■■□□□ 1.3
CCDC42-203ENST00000581598 USO1O60763 962 aaKnown RBP23.2■■□□□ 1.3
CCDC42-203ENST00000581598 ARF4P18085 180 aaPredicted RBP23.2■■□□□ 1.3
CCDC42-203ENST00000581598 AFF1P51825 1210 aaKnown RBP23.2■■□□□ 1.3
CCDC42-203ENST00000581598 ITIH3Q06033 890 aa23.2■■□□□ 1.3
CCDC42-203ENST00000581598 TTC38Q5R3I4 469 aa23.2■■□□□ 1.3
CCDC42-203ENST00000581598 VN1R3Q9BXE9 311 aa23.2■■□□□ 1.3
CCDC42-203ENST00000581598 FAN1Q9Y2M0 1017 aa23.2■■□□□ 1.3
CCDC42-203ENST00000581598 TECTAO75443 2155 aa23.2■■□□□ 1.3
CCDC42-203ENST00000581598 A0A087WWV3 80 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.19■■□□□ 1.3
CCDC42-203ENST00000581598 U2AF2P26368 475 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC42-203ENST00000581598 ANP32AP39687 249 aaKnown RBP23.19■■□□□ 1.3
CCDC42-203ENST00000581598 PPP4R3CPQ6ZMV5 832 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 HACE1Q8IYU2 909 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 EDAQ92838 391 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 CPB2Q96IY4 423 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 PRIMPOLQ96LW4 560 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 ADAM7Q9H2U9 754 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 DZANK1Q9NVP4 752 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 NOL7Q9UMY1 257 aaKnown RBP23.19■■□□□ 1.3
CCDC42-203ENST00000581598 GIT1Q9Y2X7 761 aa23.19■■□□□ 1.3
CCDC42-203ENST00000581598 A0A1B0GUA9 196 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 NRP1O14786 923 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 POMCP01189 267 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 FXR2P51116 673 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC42-203ENST00000581598 DSC1Q08554 894 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 GNL2Q13823 731 aaKnown RBP23.18■■□□□ 1.3
CCDC42-203ENST00000581598 PTPN14Q15678 1187 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 FAM187BQ17R55 369 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 HAUS3Q68CZ6 603 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 CDCA2Q69YH5 1023 aaPredicted RBP23.18■■□□□ 1.3
CCDC42-203ENST00000581598 PPFIBP1Q86W92 1011 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 COLGALT2Q8IYK4 626 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 SLC22A17Q8WUG5 538 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 RPGRIP1Q96KN7 1286 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 NECTIN4Q96NY8 510 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 RNF39Q9H2S5 420 aa23.18■■□□□ 1.3
CCDC42-203ENST00000581598 ARL5CA6NH57 179 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 CA8P35219 290 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 CES5AQ6NT32 575 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 SLC27A1Q6PCB7 646 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 TMEM87AQ8NBN3 555 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 AUTS2Q8WXX7 1259 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 GAD1Q99259 594 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 TRIM6Q9C030 488 aaPredicted RBP23.17■■□□□ 1.3
CCDC42-203ENST00000581598 FZD8Q9H461 694 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 GPRC5CQ9NQ84 441 aa23.17■■□□□ 1.3
CCDC42-203ENST00000581598 PRMT7Q9NVM4 692 aaPredicted RBP23.17■■□□□ 1.3
CCDC42-203ENST00000581598 DAXXQ9UER7 740 aaPredicted RBP23.17■■□□□ 1.3
CCDC42-203ENST00000581598 LILRB3O75022 631 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 EFEMP2O95967 443 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 CYP11B2P19099 503 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 PDIA5Q14554 519 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 POTEGQ6S5H5 508 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 C2orf40Q9H1Z8 148 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 MARCH5Q9NX47 278 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 HES2Q9Y543 173 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 STK24Q9Y6E0 443 aa23.16■■□□□ 1.3
CCDC42-203ENST00000581598 ZNF318Q5VUA4 2279 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 ARHGEF35A5YM69 484 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 LRRIQ4A6NIV6 560 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 B4GALT5O43286 388 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 SOD2P04179 222 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 MLH1P40692 756 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 MTHFRP42898 656 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 PADI6Q6TGC4 694 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 BMP8AQ7Z5Y6 402 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 HSCBQ8IWL3 235 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 ZBTB8OSQ8IWT0 167 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 RNF168Q8IYW5 571 aaPredicted RBP23.15■■□□□ 1.3
CCDC42-203ENST00000581598 HERC2P3Q9BVR0 1158 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 APOL5Q9BWW9 433 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 EMILIN2Q9BXX0 1053 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 NXF3Q9H4D5 531 aaKnown RBP23.15■■□□□ 1.3
CCDC42-203ENST00000581598 MIOSQ9NXC5 875 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 NR2E1Q9Y466 385 aa23.15■■□□□ 1.3
CCDC42-203ENST00000581598 SCNN1GP51170 649 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 ZXDAP98168 799 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 MAEAQ7L5Y9 396 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 IGSF22Q8N9C0 903 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 GSTCDQ8NEC7 633 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 RIPOR3Q96MK2 946 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 KLHL5Q96PQ7 755 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 KCNH6Q9H252 994 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 MRPL17Q9NRX2 175 aaKnown RBP23.14■■□□□ 1.29
CCDC42-203ENST00000581598 SSX2IPQ9Y2D8 614 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 KIF3AQ9Y496 699 aa23.14■■□□□ 1.29
CCDC42-203ENST00000581598 K7ELQ4 463 aaPredicted RBP23.13■■□□□ 1.29
CCDC42-203ENST00000581598 LAD1O00515 517 aa23.13■■□□□ 1.29
CCDC42-203ENST00000581598 NPTXRO95502 500 aa23.13■■□□□ 1.29
CCDC42-203ENST00000581598 EPCAMP16422 314 aa23.13■■□□□ 1.29
CCDC42-203ENST00000581598 NAMPTP43490 491 aa23.13■■□□□ 1.29
CCDC42-203ENST00000581598 TOB1P50616 345 aaPredicted RBP23.13■■□□□ 1.29
CCDC42-203ENST00000581598 KIAA1841Q6NSI8 718 aa23.13■■□□□ 1.29
CCDC42-203ENST00000581598 TRIM67Q6ZTA4 783 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms