RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 ZNF609O15014 1411 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 PRPF4O43172 522 aaKnown RBP eCLIP7.9□□□□□ -1.15
CMTM4-205ENST00000581487 GAS7O60861 476 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 N4BP1O75113 896 aaKnown RBP7.9□□□□□ -1.15
CMTM4-205ENST00000581487 APOA1P02647 267 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 UBTFL6P0CB48 400 aaPredicted RBP7.9□□□□□ -1.15
CMTM4-205ENST00000581487 CYP4A11Q02928 519 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 MECOMQ03112 1051 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 CAMK1Q14012 370 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 RABL6Q3YEC7 729 aaPredicted RBP7.9□□□□□ -1.15
CMTM4-205ENST00000581487 RAD9BQ6WBX8 426 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 BRIP1Q9BX63 1249 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 AP1M1Q9BXS5 423 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 SARS2Q9NP81 518 aaKnown RBP7.9□□□□□ -1.15
CMTM4-205ENST00000581487 SENP1Q9P0U3 644 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 ZFP69BQ9UJL9 534 aa7.9□□□□□ -1.15
CMTM4-205ENST00000581487 ESYT3A0FGR9 886 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PSMD12O00232 456 aaPredicted RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PRCPP42785 496 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PHKG1Q16816 387 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 MIIPQ5JXC2 388 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ATG9AQ7Z3C6 839 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 KRT73Q86Y46 540 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 SYT2Q8N9I0 419 aaPredicted RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PPP1R14BQ96C90 147 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 TRPV6Q9H1D0 765 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 FBXL5Q9UKA1 691 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 USP31Q70CQ4 1352 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 SALL3Q9BXA9 1300 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 TK2O00142 265 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 CFLARO15519 480 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 NCK2O43639 380 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 IFNB1P01574 187 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ATF2P15336 505 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ARF5P84085 180 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ART3Q13508 389 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 CUL1Q13616 776 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 TMC5Q6UXY8 1006 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 HSPH1Q92598 858 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 NCLNQ969V3 563 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 MAGOHBQ96A72 148 aaKnown RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 OLFML3Q9NRN5 406 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 EMILIN3Q9NT22 766 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 EHD2Q9NZN4 543 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 LIMA1Q9UHB6 759 aaKnown RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 TAF4O00268 1085 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 CTDNEP1O95476 244 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 KRT19P08727 400 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 LRRC63Q05C16 580 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ALX1Q15699 326 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PDCD4Q53EL6 469 aaKnown RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 RNF219Q5W0B1 726 aaPredicted RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ANO5Q75V66 913 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 CCDC80Q76M96 950 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 DGKHQ86XP1 1220 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ZNF473Q8WTR7 871 aaKnown RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 DYNLL2Q96FJ2 89 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 SERPINI1Q99574 410 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 USP40Q9NVE5 1235 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 GTF2A1LQ9UNN4 478 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PALLDQ8WX93 1383 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 EIF2S1P05198 315 aaKnown RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 CCDC166P0CW27 439 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 NCF2P19878 526 aaPredicted RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ATP6V1C1P21283 382 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ANTXR2P58335 489 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ALKBH5Q6P6C2 394 aaKnown RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ABI1Q8IZP0 508 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 LRRC40Q9H9A6 602 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 KLHL28Q9NXS3 571 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 STON1Q9Y6Q2 735 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ADGRB3O60242 1522 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 A0A1W2PQC6 194 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 BCL10O95999 233 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 MESDQ14696 234 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 SHROOM1Q2M3G4 852 aaPredicted RBP7.89□□□□□ -1.15
CMTM4-205ENST00000581487 C4orf46Q504U0 113 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 NFRKBQ6P4R8 1299 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 SLC26A7Q8TE54 656 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 TMEM60Q9H2L4 133 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 GID8Q9NWU2 228 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 PCDHA1Q9Y5I3 950 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 ADGRL3Q9HAR2 1447 aa7.89□□□□□ -1.15
CMTM4-205ENST00000581487 GOLGA8JA6NMD2 632 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 K7ENM7 598 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 SNX2O60749 519 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 TRIM16O95361 564 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 CPA3P15088 417 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 LRPAP1P30533 357 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 GUCY1A2P33402 732 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 KRT27Q7Z3Y8 459 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 RASSF3Q86WH2 238 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 C1orf131Q8NDD1 294 aaKnown RBP7.88□□□□□ -1.15
CMTM4-205ENST00000581487 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.88□□□□□ -1.15
CMTM4-205ENST00000581487 RAB20Q9NX57 234 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 MAFFQ9ULX9 164 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 MROH7-TTC4A0A0A0MT08 1334 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 ARHGEF40Q8TER5 1519 aa7.88□□□□□ -1.15
CMTM4-205ENST00000581487 ARAP3Q8WWN8 1544 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms