RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 STRN3Q13033 797 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 CAMK4Q16566 473 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 ATF7IP2Q5U623 682 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
MKS1-210ENST00000581180 EEF1DP3Q658K8 133 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 ZPBP2Q6X784 338 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 SLC24A5Q71RS6 500 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 ZNF507Q8TCN5 953 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 SCFD1Q8WVM8 642 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 SMARCE1Q969G3 411 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 CCDC47Q96A33 483 aaKnown RBP16.58■□□□□ 0.24
MKS1-210ENST00000581180 TNFSF13BQ9Y275 285 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 ANK1P16157 1881 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 UBE4BO95155 1302 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 A0A0U1RQF3 1178 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 N4BP3O15049 544 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 ZNF598Q86UK7 904 aaKnown RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 CDR2LQ86X02 465 aaPredicted RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 RNPC3Q96LT9 517 aaKnown RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 ACCSQ96QU6 501 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 EIF2AQ9BY44 585 aaKnown RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 NUP62CLQ9H1M0 184 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 MTIF3Q9H2K0 278 aaKnown RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 KIAA1468Q9P260 1216 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 GDAQ9Y2T3 454 aa16.57■□□□□ 0.24
MKS1-210ENST00000581180 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
MKS1-210ENST00000581180 PDCD11Q14690 1871 aaKnown RBP16.56■□□□□ 0.24
MKS1-210ENST00000581180 COL4A6Q14031 1691 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 MYO9BQ13459 2157 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 ZNF623O75123 536 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 AMHP03971 560 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 ATF7P17544 494 aaPredicted RBP16.56■□□□□ 0.24
MKS1-210ENST00000581180 KCNJ6P48051 423 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 MRPL10Q7Z7H8 261 aaKnown RBP16.56■□□□□ 0.24
MKS1-210ENST00000581180 ECHDC2Q86YB7 292 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 TDHQ8IZJ6 230 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 TOP1MTQ969P6 601 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
MKS1-210ENST00000581180 SLC9A7Q96T83 725 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
MKS1-210ENST00000581180 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 MAN1B1Q9UKM7 699 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 SLC4A7Q9Y6M7 1214 aa16.56■□□□□ 0.24
MKS1-210ENST00000581180 ZMYM2Q9UBW7 1377 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 TOM1L1O75674 476 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 NPTXRO95502 500 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 PTMSP20962 102 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 RAB27AP51159 221 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 MYOCDQ8IZQ8 938 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 SMG8Q8ND04 991 aaKnown RBP16.55■□□□□ 0.24
MKS1-210ENST00000581180 PHOSPHO2Q8TCD6 241 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 HAPLN2Q9GZV7 340 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 EXOC7Q9UPT5 735 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
MKS1-210ENST00000581180 PCDHB2Q9Y5E7 798 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 STYXL1Q9Y6J8 313 aa16.55■□□□□ 0.24
MKS1-210ENST00000581180 RALGAPA2Q2PPJ7 1873 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 A0A1W2PPC1 479 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 TISP43B9A030 160 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 HNRNPDLO14979 420 aaKnown RBP16.54■□□□□ 0.24
MKS1-210ENST00000581180 EOMESO95936 686 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 SKIP12755 728 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 BMP6P22004 513 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 LIG4P49917 911 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 MCL1Q07820 350 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 MORC3Q14149 939 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 DCAF4L1Q3SXM0 396 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 COBLL1Q53SF7 1204 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 ZNF658Q5TYW1 1059 aaPredicted RBP16.54■□□□□ 0.24
MKS1-210ENST00000581180 MPZL3Q6UWV2 235 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 RBM43Q6ZSC3 357 aaKnown RBP16.54■□□□□ 0.24
MKS1-210ENST00000581180 TMCO2Q7Z6W1 182 aaPredicted RBP16.54■□□□□ 0.24
MKS1-210ENST00000581180 NPAS4Q8IUM7 802 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 BICD1Q96G01 975 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 ADPGKQ9BRR6 497 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 CDT1Q9H211 546 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 RNF19AQ9NV58 838 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 TMEM161AQ9NX61 479 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 IPPQ9Y573 584 aa16.54■□□□□ 0.24
MKS1-210ENST00000581180 TGFB1I1O43294 461 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 STAG3L1P0CL83 205 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 MCF2P10911 925 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 ATP2A2P16615 1042 aaKnown RBP16.53■□□□□ 0.24
MKS1-210ENST00000581180 ADSSP30520 456 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 ZNF568Q3ZCX4 644 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 FAM109BQ6ICB4 259 aaPredicted RBP16.53■□□□□ 0.24
MKS1-210ENST00000581180 HERC6Q8IVU3 1022 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 NELFCDQ8IXH7 590 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms