RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SRPK1Q96SB4 655 aaKnown RBP4.85□□□□□ -1.63
SMG8-205ENST00000580798 MRPL4Q9BYD3 311 aaKnown RBP4.85□□□□□ -1.63
SMG8-205ENST00000580798 TMX1Q9H3N1 280 aa4.85□□□□□ -1.63
SMG8-205ENST00000580798 TRIM39Q9HCM9 518 aa4.85□□□□□ -1.63
SMG8-205ENST00000580798 IFT57Q9NWB7 429 aa4.85□□□□□ -1.63
SMG8-205ENST00000580798 DDX56Q9NY93 547 aaKnown RBP4.85□□□□□ -1.63
SMG8-205ENST00000580798 NRBP1Q9UHY1 535 aa4.85□□□□□ -1.63
SMG8-205ENST00000580798 NOL7Q9UMY1 257 aaKnown RBP4.85□□□□□ -1.63
SMG8-205ENST00000580798 UBE2QL1A1L167 161 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 C2orf78A6NCI8 922 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 GOLGA6L6A8MZA4 724 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 KCNQ2O43526 872 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 B3GALT2O43825 422 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 HMMRO75330 724 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 KRT37O76014 449 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 NPTXRO95502 500 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 CT47B1P0C2W7 299 aaPredicted RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 SCP2P22307 547 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 PEX19P40855 299 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 TNNT2P45379 298 aaPredicted RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 UBE4AQ14139 1066 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 ODR4Q5SWX8 454 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 CC2D1AQ6P1N0 951 aaPredicted RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 ELOA2Q8IYF1 753 aaPredicted RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 JMYQ8N9B5 988 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 ANKRD53Q8N9V6 530 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 BEND2Q8NDZ0 799 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 ATXN2LQ8WWM7 1075 aaKnown RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 BOCQ9BWV1 1114 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 OSBPL2Q9H1P3 480 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 SLKQ9H2G2 1235 aaPredicted RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 PIF1Q9H611 641 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 IFT122Q9HBG6 1241 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 RBM8AQ9Y5S9 174 aaKnown RBP4.84□□□□□ -1.63
SMG8-205ENST00000580798 PTCH2Q9Y6C5 1203 aa4.84□□□□□ -1.63
SMG8-205ENST00000580798 POLR2AP24928 1970 aaKnown RBP4.84□□□□□ -1.64
SMG8-205ENST00000580798 FOSP01100 380 aaPredicted RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 CDK4P11802 303 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 RGS3P49796 1198 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 MECP2P51608 486 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 BPIFB4P59827 614 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 PSMC1P62191 440 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 SLC6A3Q01959 620 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 RBL2Q08999 1139 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 BMS1Q14692 1282 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 MAPRE1Q15691 268 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 FKBP15Q5T1M5 1219 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 MB21D1Q8N884 522 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 IL17RAQ96F46 866 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 MRFAP1L1Q96HT8 127 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 C8orf48Q96LL4 319 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 MPHOSPH6Q99547 160 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 TCF25Q9BQ70 676 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 NCOA5Q9HCD5 579 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 TYW1Q9NV66 732 aaKnown RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 SAE1Q9UBE0 346 aaPredicted RBP4.83□□□□□ -1.64
SMG8-205ENST00000580798 DENND2AQ9ULE3 1009 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 SYNPO2Q9UMS6 1093 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 PRKAB1Q9Y478 270 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
SMG8-205ENST00000580798 M0R2C6 588 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 DVL2O14641 736 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 KIF3BO15066 747 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 H2AFYO75367 372 aaKnown RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 GLRX3O76003 335 aaKnown RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 LDHAP00338 332 aaKnown RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 PRLP01236 227 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 ZFP36P26651 326 aaKnown RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 FNTBP49356 437 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 KIF11P52732 1056 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 SESN2P58004 480 aaPredicted RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 ANTXR2P58335 489 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 EVA1CP58658 441 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 ROM1Q03395 351 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 PPP2R5AQ15172 486 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 C2orf27AQ580R0 203 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 NBPF5PQ86XG9 351 aaPredicted RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMG8-205ENST00000580798 GCDHQ92947 438 aaPredicted RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 IL23AQ9NPF7 189 aa4.82□□□□□ -1.64
SMG8-205ENST00000580798 ISY1Q9ULR0 285 aaKnown RBP4.82□□□□□ -1.64
SMG8-205ENST00000580798 CCDC163A0A0D9SF12 145 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 GOLGA8BA8MQT2 603 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 CAND2O75155 1236 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 KRT18P05783 430 aaKnown RBP4.81□□□□□ -1.64
SMG8-205ENST00000580798 PDGFRBP09619 1106 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 TCIRG1Q13488 830 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 KCTD2Q14681 263 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 VPS72Q15906 364 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 CCDC92Q53HC0 331 aaPredicted RBP4.81□□□□□ -1.64
SMG8-205ENST00000580798 EPHA10Q5JZY3 1008 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 TAF3Q5VWG9 929 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 SLFN12LQ6IEE8 588 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms