RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ERGIC2Q96RQ1 377 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RHOXF2Q9BQY4 288 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TTYH3Q9C0H2 523 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ARHGAP28Q9P2N2 729 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SUCLA2Q9P2R7 463 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FAM184BQ9ULE4 1060 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 EPHB6O15197 1021 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 EXOC3O60645 756 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CCND3P30281 292 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CYLC1P35663 651 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RFC5P40937 340 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZNF200P98182 395 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CDR2LQ86X02 465 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SPIRE2Q8WWL2 714 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DUSP10Q9Y6W6 482 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MYH11P35749 1972 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GPR25O00155 361 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 C22orf31O95567 290 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 VTNP04004 478 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MYL3P08590 195 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TRIM49P0CI25 452 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TRIM49CP0CI26 452 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 XRCC5P13010 732 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TMEM62Q0P6H9 643 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KIAA0753Q2KHM9 967 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MARCH8Q5T0T0 291 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CCDC122Q5T0U0 273 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 BICD1Q96G01 975 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 IGKV6-21A0A0C4DH24 114 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 K7ERI5 159 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HNRNPDLO14979 420 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SRGAP2O75044 1071 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MYCP01106 439 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CYBAP13498 195 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MAP2K2P36507 400 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SLC26A2P50443 739 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DLG4P78352 724 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CYP27A1Q02318 531 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KCNH2Q12809 1159 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KIF22Q14807 665 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SEZ6Q53EL9 994 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CC2D1AQ6P1N0 951 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RRAGAQ7L523 313 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MAP4K3Q8IVH8 894 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PNKPQ96T60 521 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TARS2Q9BW92 718 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ST6GALNAC4Q9H4F1 302 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TMEM206Q9H813 350 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DMAC2Q9NW81 257 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PLEKP08567 350 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PPFIA1Q13136 1202 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZNF296Q8WUU4 475 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 AP5M1Q9H0R1 490 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HSPBP1Q9NZL4 362 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 AKR1A1P14550 325 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NAMPTP43490 491 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RTP1P59025 263 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KRT83P78385 493 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KCNMA1Q12791 1236 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GRIK4Q16099 956 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GNASQ5JWF2 1037 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NAPGQ99747 312 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HAPLN2Q9GZV7 340 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NLRC4Q9NPP4 1024 aa13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■■■□ 19.4
CDK5RAP3-217ENST00000580287 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TULP2O00295 520 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 LRRN2O75325 713 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 IQCF3P0C7M6 154 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 EPB41P11171 864 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MEA1Q16626 185 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 IER5Q5VY09 327 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms