RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 BCL7CQ8WUZ0 217 aaPredicted RBP19.94■□□□□ 0.78
MKS1-209ENST00000580127 AIFM3Q96NN9 605 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 RPS6KC1Q96S38 1066 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 C2CD2LO14523 706 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 LILRB3O75022 631 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 C1RP00736 705 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 TMEM105Q8N8V8 129 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 ZNF579Q8NAF0 562 aaKnown RBP19.93■□□□□ 0.78
MKS1-209ENST00000580127 FLCNQ8NFG4 579 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 HDAC7Q8WUI4 952 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 RTP3Q9BQQ7 232 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 MINDY3Q9H8M7 445 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 PCDHA12Q9UN75 941 aa19.93■□□□□ 0.78
MKS1-209ENST00000580127 CCDC195A0A1B0GUA6 201 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 ARL5CA6NH57 179 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 INO80B-WBP1J3KQ70 363 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 STK25O00506 426 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 GLUD1P00367 558 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 GLUD2P49448 558 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 PTENP60484 403 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 ANKRD1Q15327 319 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 UBXN11Q5T124 520 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 HAS1Q92839 578 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 NXPE3Q969Y0 559 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 DYDC2Q96IM9 177 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 VN1R3Q9BXE9 311 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 RHOBTB2Q9BYZ6 727 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 CSRNP2Q9H175 543 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 KCNK12Q9HB15 430 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 RGL1Q9NZL6 768 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 GIT1Q9Y2X7 761 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 PRG3Q9Y2Y8 225 aaPredicted RBP19.92■□□□□ 0.78
MKS1-209ENST00000580127 IPPQ9Y573 584 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 STK36Q9NRP7 1315 aa19.92■□□□□ 0.78
MKS1-209ENST00000580127 DGAT1O75907 488 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 RFX1P22670 979 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 GBP2P32456 591 aaPredicted RBP19.91■□□□□ 0.78
MKS1-209ENST00000580127 NBL1P41271 181 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 CREMQ03060 361 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 CTTNQ14247 550 aaKnown RBP19.91■□□□□ 0.78
MKS1-209ENST00000580127 COLGALT2Q8IYK4 626 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 GAD1Q99259 594 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 HERC2P3Q9BVR0 1158 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 PLEKHA4Q9H4M7 779 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 PIDD1Q9HB75 910 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 MAN1C1Q9NR34 630 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.91■□□□□ 0.78
MKS1-209ENST00000580127 BMP2KQ9NSY1 1161 aaPredicted RBP19.91■□□□□ 0.78
MKS1-209ENST00000580127 ANKEF1Q9NU02 776 aa19.91■□□□□ 0.78
MKS1-209ENST00000580127 INPPL1O15357 1258 aa19.9■□□□□ 0.78
MKS1-209ENST00000580127 FOXK2Q01167 660 aa19.9■□□□□ 0.78
MKS1-209ENST00000580127 CYP4A11Q02928 519 aa19.9■□□□□ 0.78
MKS1-209ENST00000580127 KIAA0319Q5VV43 1072 aa19.9■□□□□ 0.78
MKS1-209ENST00000580127 GPR65Q8IYL9 337 aa19.9■□□□□ 0.78
MKS1-209ENST00000580127 SMG8Q8ND04 991 aaKnown RBP19.9■□□□□ 0.78
MKS1-209ENST00000580127 NKD2Q969F2 451 aaPredicted RBP19.9■□□□□ 0.78
MKS1-209ENST00000580127 WDR6Q9NNW5 1121 aaKnown RBP19.9■□□□□ 0.78
MKS1-209ENST00000580127 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.9■□□□□ 0.78
MKS1-209ENST00000580127 WRAP73Q9P2S5 460 aaPredicted RBP19.9■□□□□ 0.78
MKS1-209ENST00000580127 TEX28O15482 410 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 PFKFB2O60825 505 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 SLITRK3O94933 977 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 LYPLA2O95372 231 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 XRCC6P12956 609 aaKnown RBP eCLIP19.89■□□□□ 0.77
MKS1-209ENST00000580127 AOC1P19801 751 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 KRT2P35908 639 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 AFF1P51825 1210 aaKnown RBP19.89■□□□□ 0.77
MKS1-209ENST00000580127 SCRN1Q12765 414 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 USP41Q3LFD5 358 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 IFNLR1Q8IU57 520 aaPredicted RBP19.89■□□□□ 0.77
MKS1-209ENST00000580127 SMOC2Q9H3U7 446 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 RXFP1Q9HBX9 757 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 ORC3Q9UBD5 711 aaPredicted RBP19.89■□□□□ 0.77
MKS1-209ENST00000580127 WNT16Q9UBV4 365 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 DAXXQ9UER7 740 aaPredicted RBP19.89■□□□□ 0.77
MKS1-209ENST00000580127 DUSP12Q9UNI6 340 aa19.89■□□□□ 0.77
MKS1-209ENST00000580127 B4GALT3O60512 393 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 TSPAN1O60635 241 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 MLH1P40692 756 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 DSG1Q02413 1049 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 CALCRLQ16602 461 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 SIX5Q8N196 739 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 SMG7Q92540 1137 aaKnown RBP19.88■□□□□ 0.77
MKS1-209ENST00000580127 EIF2AK1Q9BQI3 630 aaKnown RBP19.88■□□□□ 0.77
MKS1-209ENST00000580127 APOL6Q9BWW8 343 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 EIF2AQ9BY44 585 aaKnown RBP19.88■□□□□ 0.77
MKS1-209ENST00000580127 NFKBIZQ9BYH8 718 aa19.88■□□□□ 0.77
MKS1-209ENST00000580127 RIF1Q5UIP0 2472 aaKnown RBP19.88■□□□□ 0.77
MKS1-209ENST00000580127 TDRD15B5MCY1 1934 aaKnown RBP19.87■□□□□ 0.77
MKS1-209ENST00000580127 TADA2AO75478 443 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 DSC1Q08554 894 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 TRIM29Q14134 588 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 SLC27A1Q6PCB7 646 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 TAS1R1Q7RTX1 841 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 OXER1Q8TDS5 423 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 CPB2Q96IY4 423 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 HSD17B14Q9BPX1 270 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 FNIP2Q9P278 1114 aa19.87■□□□□ 0.77
MKS1-209ENST00000580127 ZBTB39O15060 712 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms