RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 EFEMP2O95967 443 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 C1RP00736 705 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 ITGA4P13612 1032 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 GCFC2P16383 781 aaKnown RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 AXLP30530 894 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 GBP2P32456 591 aaPredicted RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 OR1G1P47890 313 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 ID4P47928 161 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 DSC1Q08554 894 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 TOB2Q14106 344 aaPredicted RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 PCBP1Q15365 356 aaKnown RBP eCLIP9.55□□□□□ -0.88
CASC3-206ENST00000579238 INF2Q27J81 1249 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 KIAA0319Q5VV43 1072 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 PPP4R3AQ6IN85 833 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 CPLX2Q6PUV4 134 aaKnown RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 OTUD6AQ7L8S5 288 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 TAS1R1Q7RTX1 841 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 FERMT3Q86UX7 667 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 C4orf19Q8IY42 314 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 ZNF579Q8NAF0 562 aaKnown RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 RNF149Q8NC42 400 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 SMG8Q8ND04 991 aaKnown RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 HDAC7Q8WUI4 952 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 CCDC51Q96ER9 411 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 SEMA4AQ9H3S1 761 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 WRAP73Q9P2S5 460 aaPredicted RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 PRG3Q9Y2Y8 225 aaPredicted RBP9.55□□□□□ -0.88
CASC3-206ENST00000579238 IPPQ9Y573 584 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 C2orf16Q68DN1 1984 aa9.55□□□□□ -0.88
CASC3-206ENST00000579238 KRBA1A5PL33 1030 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 ARL5CA6NH57 179 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 STK25O00506 426 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 TBX3O15119 743 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 NR1I2O75469 434 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 RFPL2O75678 378 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 REC8O95072 547 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 CFHP08603 1231 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 SRFP11831 508 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 RFX1P22670 979 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 YWHABP31946 246 aaKnown RBP9.54□□□□□ -0.88
CASC3-206ENST00000579238 GLUD2P49448 558 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 PTENP60484 403 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 DSG1Q02413 1049 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 EMC2Q15006 297 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 EPHA7Q15375 998 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 NOTUMQ6P988 496 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 NEK8Q86SG6 692 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 GPR65Q8IYL9 337 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 SLC44A3Q8N4M1 653 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 RSAD2Q8WXG1 361 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 SMG7Q92540 1137 aaKnown RBP9.54□□□□□ -0.88
CASC3-206ENST00000579238 ZNF274Q96GC6 653 aaPredicted RBP9.54□□□□□ -0.88
CASC3-206ENST00000579238 AIFM3Q96NN9 605 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 MYADMQ96S97 322 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 GAD1Q99259 594 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 LXNQ9BS40 222 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 COLEC11Q9BWP8 271 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 EIF2AQ9BY44 585 aaKnown RBP9.54□□□□□ -0.88
CASC3-206ENST00000579238 PLEKHA4Q9H4M7 779 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 ZSWIM6Q9HCJ5 1215 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.54□□□□□ -0.88
CASC3-206ENST00000579238 ZDHHC7Q9NXF8 308 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 GIT1Q9Y2X7 761 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 DCHS1Q96JQ0 3298 aa9.54□□□□□ -0.88
CASC3-206ENST00000579238 DMDP11532 3685 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 CCDC194A0A1B0GVG4 234 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 TSPAN1O60635 241 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 LMNAP02545 664 aaKnown RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 MLH1P40692 756 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 SCNN1GP51170 649 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 MXD4Q14582 209 aaPredicted RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 XKR9Q5GH70 373 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 PHLDB3Q6NSJ2 640 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 HACE1Q8IYU2 909 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 HAS1Q92839 578 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 ZNF707Q96C28 371 aaPredicted RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 MTRQ99707 1265 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 NT5C3AQ9H0P0 336 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 ZSWIM4Q9H7M6 989 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 TBC1D17Q9HA65 648 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 PIDD1Q9HB75 910 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 CHST7Q9NS84 486 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
CASC3-206ENST00000579238 MIOSQ9NXC5 875 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.53□□□□□ -0.88
CASC3-206ENST00000579238 RGL1Q9NZL6 768 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 FNIP2Q9P278 1114 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 CA14Q9ULX7 337 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 KCNJ14Q9UNX9 436 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 HES2Q9Y543 173 aa9.53□□□□□ -0.88
CASC3-206ENST00000579238 CYP46A1Q9Y6A2 500 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms