RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ZDHHC7Q9NXF8 308 aa8.12□□□□□ -1.11
CDK5RAP3-209ENST00000578663 AKT3Q9Y243 479 aa8.12□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MTF2Q9Y483 593 aaPredicted RBP8.12□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MAFBQ9Y5Q3 323 aaPredicted RBP8.12□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NUMBLQ9Y6R0 609 aa8.12□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ZNF623O75123 536 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 FOSP01100 380 aaPredicted RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SOD2P04179 222 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ATP4AP20648 1035 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CHMLP26374 656 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SLC11A1P49279 550 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NOVA1P51513 510 aaKnown RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 GPC3P51654 580 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CLCN3P51790 818 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CDC42EP1Q00587 391 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 PFKPQ01813 784 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RNASELQ05823 741 aaKnown RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 UBE2SQ16763 222 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 AASDHQ4L235 1098 aaPredicted RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CWC27Q6UX04 472 aaKnown RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MTSS1LQ765P7 747 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 PIBF1Q8WXW3 757 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 LRIG1Q96JA1 1093 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RPS6KC1Q96S38 1066 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NELL2Q99435 816 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 TMEM175Q9BSA9 504 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MTA3Q9BTC8 594 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 IER2Q9BTL4 223 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 HERC2P3Q9BVR0 1158 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RXFP1Q9HBX9 757 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 LTB4R2Q9NPC1 389 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RAB23Q9ULC3 237 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NEUROG3Q9Y4Z2 214 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 URB1O60287 2271 aaKnown RBP8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NOTCH2Q04721 2471 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CREBBPQ92793 2442 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CACNA1EQ15878 2313 aa8.11□□□□□ -1.11
CDK5RAP3-209ENST00000578663 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MTCL1Q9Y4B5 1905 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NCAM2O15394 837 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 TEX28O15482 410 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MAP3K13O43283 966 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CDC45O75419 566 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SREBF1P36956 1147 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NRLP54845 237 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 UBXN2BQ14CS0 331 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ZBTB41Q5SVQ8 909 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 EFCAB12Q6NXP0 572 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 PPP1R18Q6NYC8 613 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 GET4Q7L5D6 327 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RALYLQ86SE5 291 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CKAP2LQ8IYA6 745 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RNF168Q8IYW5 571 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ZNF654Q8IZM8 581 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CELF5Q8N6W0 485 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 URGCPQ8TCY9 931 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 HNRNPLLQ8WVV9 542 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 PHKBQ93100 1093 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NT5C3AQ9H0P0 336 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CLMPQ9H6B4 373 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 DNAJB4Q9UDY4 337 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 KLK13Q9UKR3 277 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SRPK3Q9UPE1 567 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MSRB2Q9Y3D2 182 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 U3KPZ7 1027 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 TSC2P49815 1807 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 EML5Q05BV3 1969 aa8.1□□□□□ -1.11
CDK5RAP3-209ENST00000578663 PTPRQQ9UMZ3 2332 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 CNTNAP2Q9UHC6 1331 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 FAM170BA6NMN3 283 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 HYAL3O43820 417 aaPredicted RBP8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 B4GALT3O60512 393 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 OFD1O75665 1012 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 RFPL2O75678 378 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 EFEMP2O95967 443 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NTRK1P04629 796 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SFPQP23246 707 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 GLUD2P49448 558 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 AK2P54819 239 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 GPC5P78333 572 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 AP3B2Q13367 1082 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SLC44A4Q53GD3 710 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 TWF2Q6IBS0 349 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SWSAP1Q6NVH7 229 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SRBD1Q8N5C6 995 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 NCOA7Q8NI08 942 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 IGDCC4Q8TDY8 1250 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 PGBD4Q96DM1 585 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 SCLT1Q96NL6 688 aa8.09□□□□□ -1.11
CDK5RAP3-209ENST00000578663 MYL10Q9BUA6 226 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms