RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 FOXP2O15409 715 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 PRPF3O43395 683 aaKnown RBP6.81□□□□□ -1.32
PTPRM-208ENST00000578600 H2AFYO75367 372 aaKnown RBP6.81□□□□□ -1.32
PTPRM-208ENST00000578600 MYL1P05976 194 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 GRIN1Q05586 938 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 RAB3GAP1Q15042 981 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 EPHA7Q15375 998 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 PLEKHN1Q494U1 663 aaPredicted RBP6.81□□□□□ -1.32
PTPRM-208ENST00000578600 MAP9Q49MG5 647 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 PLEKHO1Q53GL0 409 aaPredicted RBP6.81□□□□□ -1.32
PTPRM-208ENST00000578600 PPP4R4Q6NUP7 873 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 MIB1Q86YT6 1006 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 TPH2Q8IWU9 490 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 CMIPQ8IY22 773 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 RTF1Q92541 710 aaKnown RBP6.81□□□□□ -1.32
PTPRM-208ENST00000578600 GCC1Q96CN9 775 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 HSPBAP1Q96EW2 488 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 HSPBP1Q9NZL4 362 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 USP36Q9P275 1121 aaKnown RBP6.81□□□□□ -1.32
PTPRM-208ENST00000578600 ASAP1Q9ULH1 1129 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 C4BP0C0L5 1744 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 A0A1W2PP64 1363 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 TONSLQ96HA7 1378 aa6.81□□□□□ -1.32
PTPRM-208ENST00000578600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.8□□□□□ -1.32
PTPRM-208ENST00000578600 LCHNA4D1U4 455 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 KDM6AO15550 1401 aaPredicted RBP6.8□□□□□ -1.32
PTPRM-208ENST00000578600 PHKG2P15735 406 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 FAHP16930 419 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 TM4SF1P30408 202 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 CYP2C19P33261 490 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 MAP2K2P36507 400 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 GPR3P46089 330 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 LBX1P52954 281 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 HERVK_113P62684 666 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 HDAC1Q13547 482 aaPredicted RBP6.8□□□□□ -1.32
PTPRM-208ENST00000578600 ITPK1Q13572 414 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 PDCD1Q15116 288 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 MINDY4Q4G0A6 757 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 PAN2Q504Q3 1202 aaKnown RBP6.8□□□□□ -1.32
PTPRM-208ENST00000578600 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 C7orf31Q8N865 590 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 TGFBRAP1Q8WUH2 860 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 CLIP3Q96DZ5 547 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 ZFP64Q9NPA5 681 aa6.8□□□□□ -1.32
PTPRM-208ENST00000578600 CCM2LQ9NUG4 571 aaPredicted RBP6.8□□□□□ -1.32
PTPRM-208ENST00000578600 DBR1Q9UK59 544 aaKnown RBP6.8□□□□□ -1.32
PTPRM-208ENST00000578600 USP42Q9H9J4 1324 aaKnown RBP6.79□□□□□ -1.32
PTPRM-208ENST00000578600 SCO2A0A1W2PP80 73 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 OR14I1A6ND48 311 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 VSTM5A8MXK1 200 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.79□□□□□ -1.32
PTPRM-208ENST00000578600 HRKO00198 91 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 FYB1O15117 783 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 TPD52L2O43399 206 aaKnown RBP6.79□□□□□ -1.32
PTPRM-208ENST00000578600 GLI1P08151 1106 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 RHBDL3P58872 404 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 ODF1Q14990 250 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 C1orf141Q5JVX7 400 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 KSR2Q6VAB6 950 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 ESPNLQ6ZVH7 1005 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 DGKHQ86XP1 1220 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 FAM126BQ8IXS8 530 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 CMTR2Q8IYT2 770 aaKnown RBP6.79□□□□□ -1.32
PTPRM-208ENST00000578600 ERCC4Q92889 916 aaPredicted RBP6.79□□□□□ -1.32
PTPRM-208ENST00000578600 NUP88Q99567 741 aaPredicted RBP6.79□□□□□ -1.32
PTPRM-208ENST00000578600 TAOK3Q9H2K8 898 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 ARNT2Q9HBZ2 717 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 DNAJC28Q9NX36 388 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 C5P01031 1676 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 USP54Q70EL1 1684 aa6.79□□□□□ -1.32
PTPRM-208ENST00000578600 TNRC6CQ9HCJ0 1690 aaKnown RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ST20-MTHFSA0A0A6YYL1 179 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 POLRMTO00411 1230 aaKnown RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ABLIM1O14639 778 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 NPHP1O15259 732 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 PCDHGA12O60330 932 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 LRG1P02750 347 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 TMEM253P0C7T8 217 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 MTHFSP49914 203 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 TMEM62Q0P6H9 643 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 GTF2H3Q13889 308 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 RRS1Q15050 365 aaKnown RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 TIGD7Q6NT04 549 aaPredicted RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 AMIGO3Q86WK7 504 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 C2CD5Q86YS7 1000 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 HIPK4Q8NE63 616 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ASB15Q8WXK1 588 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 E2F7Q96AV8 911 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 FOXRED1Q96CU9 486 aaPredicted RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ZNF496Q96IT1 587 aaPredicted RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 LRGUKQ96M69 825 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 BRIP1Q9BX63 1249 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
PTPRM-208ENST00000578600 OBP2AQ9NY56 170 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 DTLQ9NZJ0 730 aa6.78□□□□□ -1.32
PTPRM-208ENST00000578600 BTBD7Q9P203 1132 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms