RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	RXFP1	Q9HBX9	757 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NGRN	Q9NPE2	291 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	INPP5F	Q9Y2H2	1132 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PTPRZ1	P23471	2315 aa	Predicted RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TDRD15	B5MCY1	1934 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329		A0A1B0GUA9	196 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KRBA1	A5PL33	1030 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CCNT1	O60563	726 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RFPL2	O75678	378 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SPATA31D3	P0C874	917 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ZSCAN20	P17040	1043 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	HOXB8	P17481	243 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RPL17	P18621	184 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	AKAP5	P24588	427 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TMOD1	P28289	359 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MLH1	P40692	756 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SCNN1G	P51170	649 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	POLG	P54098	1239 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GUCY1B3	Q02153	619 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	POU5F1B	Q06416	359 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SOX4	Q06945	474 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MAPK7	Q13164	816 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SMC1A	Q14683	1233 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CSPP1	Q1MSJ5	1256 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	C8orf34	Q49A92	452 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	XKR9	Q5GH70	373 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RTP2	Q5QGT7	225 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SPOUT1	Q5T280	376 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NT5DC1	Q5TFE4	455 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TWF2	Q6IBS0	349 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NCAPH2	Q6IBW4	605 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KIAA1841	Q6NSI8	718 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TMC5	Q6UXY8	1006 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SPATA31D4	Q6ZUB0	917 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CATSPER4	Q7RTX7	472 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SRGAP1	Q7Z6B7	1085 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GPR149	Q86SP6	731 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CATSPER3	Q86XQ3	398 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	DIS3L2	Q8IYB7	885 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TRIM22	Q8IYM9	498 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ZDHHC14	Q8IZN3	488 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	C3orf58	Q8NDZ4	430 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TNPO1	Q92973	898 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PBXIP1	Q96AQ6	731 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CEP170P1	Q96L14	293 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RIPOR3	Q96MK2	946 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MYADM	Q96S97	322 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MMTAG2	Q9BU76	263 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GBP3	Q9H0R5	595 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CSRNP2	Q9H175	543 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SLK	Q9H2G2	1235 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FZD8	Q9H461	694 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TTC12	Q9H892	705 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RSAD1	Q9HA92	442 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ENTPD7	Q9NQZ7	604 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	DACT1	Q9NYF0	836 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KLK14	Q9P0G3	267 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	LIMD1	Q9UGP4	676 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	HCN4	Q9Y3Q4	1203 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CEP250	Q9BV73	2442 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CACNA1I	Q9P0X4	2223 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	COL4A2	P08572	1712 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NCAN	O14594	1321 aa		4.97	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CCDC194	A0A1B0GVG4	234 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PP2D1	A8MPX8	630 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CPLX1	O14810	134 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	HOXA2	O43364	376 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	KIF4A	O95239	1232 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	VNN2	O95498	520 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SOD2	P04179	222 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SSB	P05455	408 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GLUL	P15104	373 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GCFC2	P16383	781 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SFPQ	P23246	707 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PPM1A	P35813	382 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	RFC5	P40937	340 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ALDH7A1	P49419	539 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ANAPC15	P60006	121 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	NTHL1	P78549	312 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	AKAP17A	Q02040	695 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	DSG1	Q02413	1049 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ODR4	Q5SWX8	454 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SCARA3	Q6AZY7	606 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GLB1L	Q6UWU2	654 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PPP4R3CP	Q6ZMV5	832 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ASCL5	Q7RTU5	278 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	TPH2	Q8IWU9	490 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ZNF710	Q8N1W2	664 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CEP120	Q8N960	986 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PSPC1	Q8WXF1	523 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CASP10	Q92851	521 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ZMAT2	Q96NC0	199 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	RPS6KC1	Q96S38	1066 aa		4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	POP1	Q99575	1024 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CLSTN3	Q9BQT9	956 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms