RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 EMC2Q15006 297 aa8.83□□□□□ -1
COPS3-215ENST00000578317 MTHFD1LQ6UB35 978 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ZNF720Q7Z2F6 126 aa8.83□□□□□ -1
COPS3-215ENST00000578317 RPAINQ86UA6 219 aa8.83□□□□□ -1
COPS3-215ENST00000578317 NME8Q8N427 588 aa8.83□□□□□ -1
COPS3-215ENST00000578317 C7orf31Q8N865 590 aa8.83□□□□□ -1
COPS3-215ENST00000578317 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
COPS3-215ENST00000578317 GLT1D1Q96MS3 346 aa8.83□□□□□ -1
COPS3-215ENST00000578317 FIZ1Q96SL8 496 aa8.83□□□□□ -1
COPS3-215ENST00000578317 MKNK1Q9BUB5 465 aa8.83□□□□□ -1
COPS3-215ENST00000578317 STRA6Q9BX79 667 aa8.83□□□□□ -1
COPS3-215ENST00000578317 EXOC1Q9NV70 894 aa8.83□□□□□ -1
COPS3-215ENST00000578317 SETD4Q9NVD3 440 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ZNF358Q9NW07 568 aa8.83□□□□□ -1
COPS3-215ENST00000578317 MKI67P46013 3256 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 GRIN2DO15399 1336 aa8.83□□□□□ -1
COPS3-215ENST00000578317 DNAH12Q6ZR08 3092 aa8.83□□□□□ -1
COPS3-215ENST00000578317 SMIM35A0A1B0GVV1 85 aa8.83□□□□□ -1
COPS3-215ENST00000578317 RSPH10B2B2RC85 870 aa8.83□□□□□ -1
COPS3-215ENST00000578317 RSPH10BP0C881 870 aa8.83□□□□□ -1
COPS3-215ENST00000578317 GJA8P48165 433 aa8.83□□□□□ -1
COPS3-215ENST00000578317 SMTNP53814 917 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ALCAMQ13740 583 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ARID5BQ14865 1188 aa8.83□□□□□ -1
COPS3-215ENST00000578317 PPP2R5AQ15172 486 aa8.83□□□□□ -1
COPS3-215ENST00000578317 STX1AQ16623 288 aa8.83□□□□□ -1
COPS3-215ENST00000578317 FAM26FQ5R3K3 315 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ODR4Q5SWX8 454 aa8.83□□□□□ -1
COPS3-215ENST00000578317 FAM102BQ5T8I3 360 aa8.83□□□□□ -1
COPS3-215ENST00000578317 EFCAB12Q6NXP0 572 aa8.83□□□□□ -1
COPS3-215ENST00000578317 FOXR2Q6PJQ5 311 aa8.83□□□□□ -1
COPS3-215ENST00000578317 KIAA0319LQ8IZA0 1049 aa8.83□□□□□ -1
COPS3-215ENST00000578317 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 MYCT1Q8N699 235 aa8.83□□□□□ -1
COPS3-215ENST00000578317 U2AF1L4Q8WU68 220 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 LMBR1Q8WVP7 490 aa8.83□□□□□ -1
COPS3-215ENST00000578317 PSPC1Q8WXF1 523 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 COL26A1Q96A83 441 aa8.83□□□□□ -1
COPS3-215ENST00000578317 IFT74Q96LB3 600 aa8.83□□□□□ -1
COPS3-215ENST00000578317 BPIFA3Q9BQP9 254 aa8.83□□□□□ -1
COPS3-215ENST00000578317 NFKBIZQ9BYH8 718 aa8.83□□□□□ -1
COPS3-215ENST00000578317 GPRC5CQ9NQ84 441 aa8.83□□□□□ -1
COPS3-215ENST00000578317 HDAC6Q9UBN7 1215 aa8.83□□□□□ -1
COPS3-215ENST00000578317 SEPT3Q9UH03 358 aa8.83□□□□□ -1
COPS3-215ENST00000578317 GTF2IRD1Q9UHL9 959 aa8.83□□□□□ -1
COPS3-215ENST00000578317 DACH1Q9UI36 760 aa8.83□□□□□ -1
COPS3-215ENST00000578317 C17orf102A2RUQ5 167 aa8.82□□□□□ -1
COPS3-215ENST00000578317 KBTBD13C9JR72 458 aa8.82□□□□□ -1
COPS3-215ENST00000578317 H0YCG3 227 aa8.82□□□□□ -1
COPS3-215ENST00000578317 BIN1O00499 593 aa8.82□□□□□ -1
COPS3-215ENST00000578317 EIF3DO15371 548 aaKnown RBP eCLIP8.82□□□□□ -1
COPS3-215ENST00000578317 KIF20AO95235 890 aa8.82□□□□□ -1
COPS3-215ENST00000578317 ZNF16P17020 682 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 GLRA2P23416 452 aa8.82□□□□□ -1
COPS3-215ENST00000578317 FSHRP23945 695 aa8.82□□□□□ -1
COPS3-215ENST00000578317 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 NAMPTP43490 491 aa8.82□□□□□ -1
COPS3-215ENST00000578317 NPTX2P47972 431 aa8.82□□□□□ -1
COPS3-215ENST00000578317 CDK7P50613 346 aa8.82□□□□□ -1
COPS3-215ENST00000578317 NCKAP1LP55160 1127 aa8.82□□□□□ -1
COPS3-215ENST00000578317 GTF2BQ00403 316 aa8.82□□□□□ -1
COPS3-215ENST00000578317 RAD51AP2Q09MP3 1159 aa8.82□□□□□ -1
COPS3-215ENST00000578317 ITGA7Q13683 1181 aa8.82□□□□□ -1
COPS3-215ENST00000578317 BMT2Q1RMZ1 405 aa8.82□□□□□ -1
COPS3-215ENST00000578317 COL13A1Q5TAT6 717 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 TAF2Q6P1X5 1199 aa8.82□□□□□ -1
COPS3-215ENST00000578317 MAEAQ7L5Y9 396 aa8.82□□□□□ -1
COPS3-215ENST00000578317 EPM2AIP1Q7L775 607 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
COPS3-215ENST00000578317 FAM178BQ8IXR5 827 aa8.82□□□□□ -1
COPS3-215ENST00000578317 ADSSL1Q8N142 457 aa8.82□□□□□ -1
COPS3-215ENST00000578317 KIAA0895Q8NCT3 520 aa8.82□□□□□ -1
COPS3-215ENST00000578317 ZNF507Q8TCN5 953 aa8.82□□□□□ -1
COPS3-215ENST00000578317 TRAPPC12Q8WVT3 735 aa8.82□□□□□ -1
COPS3-215ENST00000578317 PRPF31Q8WWY3 499 aaKnown RBP8.82□□□□□ -1
COPS3-215ENST00000578317 TMEM143Q96AN5 459 aa8.82□□□□□ -1
COPS3-215ENST00000578317 DHTKD1Q96HY7 919 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 NAT10Q9H0A0 1025 aaKnown RBP8.82□□□□□ -1
COPS3-215ENST00000578317 SUGCTQ9HAC7 445 aa8.82□□□□□ -1
COPS3-215ENST00000578317 SUCLA2Q9P2R7 463 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
COPS3-215ENST00000578317 A0A1W2PQ45 241 aaPredicted RBP8.81□□□□□ -1
COPS3-215ENST00000578317 A0A1W2PQY0 241 aa8.81□□□□□ -1
COPS3-215ENST00000578317 ARVCFO00192 962 aa8.81□□□□□ -1
COPS3-215ENST00000578317 TNFRSF10AO00220 468 aa8.81□□□□□ -1
COPS3-215ENST00000578317 ADH1CP00326 375 aa8.81□□□□□ -1
COPS3-215ENST00000578317 TFRCP02786 760 aaKnown RBP8.81□□□□□ -1
COPS3-215ENST00000578317 IGFBP4P22692 258 aa8.81□□□□□ -1
COPS3-215ENST00000578317 PRCPP42785 496 aa8.81□□□□□ -1
COPS3-215ENST00000578317 EFNA5P52803 228 aa8.81□□□□□ -1
COPS3-215ENST00000578317 PEX3P56589 373 aa8.81□□□□□ -1
COPS3-215ENST00000578317 IGBP1P78318 339 aa8.81□□□□□ -1
COPS3-215ENST00000578317 DMP1Q13316 513 aaPredicted RBP8.81□□□□□ -1
COPS3-215ENST00000578317 DRP2Q13474 957 aa8.81□□□□□ -1
COPS3-215ENST00000578317 STIM1Q13586 685 aa8.81□□□□□ -1
COPS3-215ENST00000578317 DPCR1Q3MIW9 517 aa8.81□□□□□ -1
COPS3-215ENST00000578317 C1orf53Q5VUE5 145 aa8.81□□□□□ -1
COPS3-215ENST00000578317 CENPPQ6IPU0 288 aa8.81□□□□□ -1
COPS3-215ENST00000578317 STXBP4Q6ZWJ1 553 aa8.81□□□□□ -1
COPS3-215ENST00000578317 SFR1Q86XK3 245 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms