RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SSBP3Q9BWW4 388 aaPredicted RBP2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 PLA2G12BQ9BX93 195 aa2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 AGO3Q9H9G7 860 aaKnown RBP2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 TCF7L1Q9HCS4 588 aa2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 IL23AQ9NPF7 189 aa2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 TLR9Q9NR96 1032 aa2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 GPRC5DQ9NZD1 345 aa2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 NCDNQ9UBB6 729 aa2.95□□□□□ -1.94
PTP4A1-204ENST00000578299 FAM171A2A8MVW0 826 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 K7ESM1 405 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ITGA10O75578 1167 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ENDOD1O94919 500 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 SYN1P17600 705 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ECHS1P30084 290 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ADSLP30566 484 aaPredicted RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 CRHR1P34998 444 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 PPP3CAQ08209 521 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 PIN1Q13526 163 aaPredicted RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 GRM7Q14831 915 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ODF1Q14990 250 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 NOMO1Q15155 1222 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 TCTN3Q6NUS6 607 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 FAM111BQ6SJ93 734 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 PDZD4Q76G19 769 aaPredicted RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 CMTR2Q8IYT2 770 aaKnown RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 FUKQ8N0W3 1084 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 THEMISQ8N1K5 641 aaPredicted RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 CPA6Q8N4T0 437 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 DNERQ8NFT8 737 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 OR5M3Q8NGP4 307 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 JDP2Q8WYK2 163 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 HOXB13Q92826 284 aaPredicted RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 BORCS6Q96GS4 357 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 SAMD11Q96NU1 681 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 OR14A2Q96R54 314 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 CAMKK2Q96RR4 588 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 MPHOSPH9Q99550 1183 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 BDH2Q9BUT1 245 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 CSRNP2Q9H175 543 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 BCO1Q9HAY6 547 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 METTL14Q9HCE5 456 aaKnown RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 DMRT3Q9NQL9 472 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 PLA2G3Q9NZ20 509 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 TUBD1Q9UJT1 453 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ZFR2Q9UPR6 939 aaKnown RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 DNM3Q9UQ16 869 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 ANKRD6Q9Y2G4 727 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 THRAP3Q9Y2W1 955 aaKnown RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 GIT1Q9Y2X7 761 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 LUC7L2Q9Y383 392 aaKnown RBP2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 SLC30A1Q9Y6M5 507 aa2.94□□□□□ -1.94
PTP4A1-204ENST00000578299 PATE3B3GLJ2 98 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 AKAP10O43572 662 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 FOXS1O43638 330 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 FOXD2O60548 495 aaPredicted RBP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 ABLIM3O94929 683 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 ZRANB2O95218 330 aaKnown RBP eCLIP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 IL33O95760 270 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 CT47B1P0C2W7 299 aaPredicted RBP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 MSX2P35548 267 aaPredicted RBP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 CASRP41180 1078 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 GZMKP49863 264 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 RAB27AP51159 221 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 PER3P56645 1201 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 KIF23Q02241 960 aaPredicted RBP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 HHEXQ03014 270 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 PLP2Q04941 152 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 FOXL1Q12952 345 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 HS1BP3Q53T59 392 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 MFSD5Q6N075 450 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 LILRA6Q6PI73 481 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 Q6ZVL8 140 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 MIGA2Q7L4E1 593 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 POLNQ7Z5Q5 900 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 PQLC1Q8N2U9 271 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 MIER2Q8N344 545 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 TTC9BQ8N6N2 239 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 OR7D4Q8NG98 312 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 NRG4Q8WWG1 115 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 HDAC10Q969S8 669 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 COA7Q96BR5 231 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 HSPBAP1Q96EW2 488 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 CYFIP2Q96F07 1278 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 IL17RAQ96F46 866 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 TMEM176AQ96HP8 235 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 CDC5LQ99459 802 aaKnown RBP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 NUP88Q99567 741 aaPredicted RBP2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 C7orf25Q9BPX7 421 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 ENKD1Q9H0I2 346 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 MANSC1Q9H8J5 431 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 TRPS1Q9UHF7 1281 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 IP6K2Q9UHH9 426 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 TCEAL9Q9UHQ7 104 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 ZNF180Q9UJW8 692 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 INTUQ9ULD6 942 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 EID1Q9Y6B2 187 aa2.93□□□□□ -1.94
PTP4A1-204ENST00000578299 HOXA3O43365 443 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 HTRA2O43464 458 aaPredicted RBP2.92□□□□□ -1.94
PTP4A1-204ENST00000578299 DTNBO60941 627 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms