RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PLA2G4FQ68DD2 849 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 KIAA1841Q6NSI8 718 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 KANK3Q6NY19 840 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 CATSPER4Q7RTX7 472 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 C4orf32Q8N8J7 132 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 SLC22A17Q8WUG5 538 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 BCL7CQ8WUZ0 217 aaPredicted RBP17.8■□□□□ 0.44
VAPA-204ENST00000577901 SLC7A3Q8WY07 619 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 ATOH1Q92858 354 aaPredicted RBP17.8■□□□□ 0.44
VAPA-204ENST00000577901 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
VAPA-204ENST00000577901 MEIS3P2A8K0S8 358 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 GFRA3O60609 400 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 ZNF623O75123 536 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 OFD1O75665 1012 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 LYPLA2O95372 231 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 RFC5P40937 340 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.441e-11■■□□□ 13.7
VAPA-204ENST00000577901 RAB27AP51159 221 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 PDIA5Q14554 519 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 XKR9Q5GH70 373 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 ZDHHC14Q8IZN3 488 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 TDRD5Q8NAT2 981 aaKnown RBP17.79■□□□□ 0.44
VAPA-204ENST00000577901 PGBD4Q96DM1 585 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 CCDC43Q96MW1 224 aaKnown RBP17.79■□□□□ 0.44
VAPA-204ENST00000577901 GBP3Q9H0R5 595 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 SMOC2Q9H3U7 446 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 TUFT1Q9NNX1 390 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.79■□□□□ 0.44
VAPA-204ENST00000577901 ANKEF1Q9NU02 776 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 DNAJB4Q9UDY4 337 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 DBR1Q9UK59 544 aaKnown RBP17.79■□□□□ 0.44
VAPA-204ENST00000577901 STK24Q9Y6E0 443 aa17.79■□□□□ 0.44
VAPA-204ENST00000577901 DMDP11532 3685 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 ASGR2P07307 311 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
VAPA-204ENST00000577901 XRCC6P12956 609 aaKnown RBP eCLIP17.78■□□□□ 0.448e-6■■□□□ 12.6
VAPA-204ENST00000577901 PRPHP41219 470 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 SLC11A1P49279 550 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 NPEPPSP55786 919 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 HAUS3Q68CZ6 603 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 DTHD1Q6ZMT9 781 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 CABP7Q86V35 215 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 POLR3CQ9BUI4 534 aaPredicted RBP17.78■□□□□ 0.44
VAPA-204ENST00000577901 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 LIMD1Q9UGP4 676 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 USTQ9Y2C2 406 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 PCDHB2Q9Y5E7 798 aa17.78■□□□□ 0.44
VAPA-204ENST00000577901 ZDBF2Q9HCK1 2354 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 H0Y858 1186 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
VAPA-204ENST00000577901 GAS2O43903 313 aaKnown RBP17.77■□□□□ 0.44
VAPA-204ENST00000577901 SYT1P21579 422 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 RPA1P27694 616 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 PTPN14Q15678 1187 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 TMC5Q6UXY8 1006 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 PPFIBP1Q86W92 1011 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 CATSPER3Q86XQ3 398 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 ZNF280BQ86YH2 543 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 PLCD3Q8N3E9 789 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 URGCPQ8TCY9 931 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 NACC1Q96RE7 527 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 VN1R3Q9BXE9 311 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 IFT122Q9HBG6 1241 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 LRWD1Q9UFC0 647 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 COL4A3BPQ9Y5P4 624 aa17.77■□□□□ 0.44
VAPA-204ENST00000577901 ZBTB39O15060 712 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 B4GALT3O60512 393 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 SPATA31C1P0DKV0 1188 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 MUTP22033 750 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 AGMOQ6ZNB7 445 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 TMEM105Q8N8V8 129 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 ZNF579Q8NAF0 562 aaKnown RBP17.76■□□□□ 0.43
VAPA-204ENST00000577901 TCP11Q8WWU5 503 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 DHX33Q9H6R0 707 aaKnown RBP17.76■□□□□ 0.43
VAPA-204ENST00000577901 SFXN1Q9H9B4 322 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 STK39Q9UEW8 545 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 CFAP54Q96N23 3096 aa17.76■□□□□ 0.43
VAPA-204ENST00000577901 MED24O75448 989 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 DDHD2O94830 711 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 SRGAP2CP0DJJ0 459 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 ATP2C1P98194 919 aaPredicted RBP17.75■□□□□ 0.43
VAPA-204ENST00000577901 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
VAPA-204ENST00000577901 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 IGSF22Q8N9C0 903 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 FEZF2Q8TBJ5 459 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 PRPF31Q8WWY3 499 aaKnown RBP17.75■□□□□ 0.43
VAPA-204ENST00000577901 TMEM143Q96AN5 459 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 KLHL5Q96PQ7 755 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 MTRQ99707 1265 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 EMILIN2Q9BXX0 1053 aa17.75■□□□□ 0.43
VAPA-204ENST00000577901 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 ASAP2O43150 1006 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 DGAT1O75907 488 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 BMP15O95972 392 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 ALDH2P05091 517 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 261.7 ms