RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 GDE1Q9NZC3 331 aa6.87□□□□□ -1.31
SNX11-204ENST00000577310 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
SNX11-204ENST00000577310 TELO2Q9Y4R8 837 aa6.87□□□□□ -1.31
SNX11-204ENST00000577310 PCNX1Q96RV3 2341 aa6.87□□□□□ -1.31
SNX11-204ENST00000577310 ZMYM2Q9UBW7 1377 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 NAV3Q8IVL0 2385 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TRABD2BA6NFA1 517 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TSPY2A6NKD2 308 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 PATE3B3GLJ2 98 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 NMT2O60551 498 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TOP1P11387 765 aaKnown RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 CCNE1P24864 410 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 ITPKBP27987 946 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 IL12RB1P42701 662 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TDO2P48775 406 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 PXNP49023 591 aaPredicted RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 SLC11A1P49279 550 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 NTHL1P78549 312 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 CACNB1Q02641 598 aaPredicted RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TRIP6Q15654 476 aaKnown RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 TAF1BQ53T94 588 aaPredicted RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 TANGO2Q6ICL3 276 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 LRRC69Q6ZNQ3 347 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TMPRSS7Q7RTY8 843 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 AACSQ86V21 672 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 C11orf74Q86VG3 221 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 PALB2Q86YC2 1186 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 HDDC3Q8N4P3 179 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 IL31RAQ8NI17 732 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 SEPT1Q8WYJ6 367 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 DCBLD2Q96PD2 775 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 INPP4AQ96PE3 977 aaPredicted RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 KIF2CQ99661 725 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 NUSAP1Q9BXS6 441 aaKnown RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 RBM12Q9NTZ6 932 aaKnown RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 TBC1D13Q9NVG8 400 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 KIAA1522Q9P206 1035 aaPredicted RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 PCDHB15Q9Y5E8 787 aa6.86□□□□□ -1.31
SNX11-204ENST00000577310 TDRD15B5MCY1 1934 aaKnown RBP6.86□□□□□ -1.31
SNX11-204ENST00000577310 GSTTP1A0A1W2PQM5 241 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 EXTL3O43909 919 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 CHGBP05060 677 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 ALDH2P05091 517 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 FTH1P19P0C7X4 201 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 SNHG28P0DPA3 235 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 GNAT2P19087 354 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 HOXA9P31269 272 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 EIF2S3P41091 472 aaKnown RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 MAPK8P45983 427 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 GLUD2P49448 558 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 SP4Q02446 784 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 RNASELQ05823 741 aaKnown RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 PLCB4Q15147 1175 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 CDC37Q16543 378 aaPredicted RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 GPATCH4Q5T3I0 446 aaKnown RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 MTHFD1LQ6UB35 978 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 ZNF574Q6ZN55 896 aaPredicted RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 TOGARAM2Q6ZUX3 1019 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 GPR65Q8IYL9 337 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 KIAA0319LQ8IZA0 1049 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 CCER1Q8TC90 406 aaPredicted RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 MBOAT7Q96N66 472 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 TMEM47Q9BQJ4 181 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 HERC2P3Q9BVR0 1158 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNX11-204ENST00000577310 DNAJB4Q9UDY4 337 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 SEPT9Q9UHD8 586 aaPredicted RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 NOB1Q9ULX3 412 aaKnown RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 APOBEC2Q9Y235 224 aaKnown RBP6.85□□□□□ -1.31
SNX11-204ENST00000577310 CELSR1Q9NYQ6 3014 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 PTPRDP23468 1912 aa6.85□□□□□ -1.31
SNX11-204ENST00000577310 NBASA2RRP1 2371 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 TLN1Q9Y490 2541 aaKnown RBP6.84□□□□□ -1.31
SNX11-204ENST00000577310 E9PAM4 449 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 OPLAHO14841 1288 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 ATG13O75143 517 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 XYLBO75191 536 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 EFEMP2O95967 443 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 POU2F2P09086 479 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 ENGP17813 658 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 PSMC3P17980 439 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 MRPS9P82933 396 aaKnown RBP6.84□□□□□ -1.31
SNX11-204ENST00000577310 DSG1Q02413 1049 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 CCINQ13939 588 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 NOMO2Q5JPE7 1267 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 WDR44Q5JSH3 913 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 PMS2CLQ68D20 193 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 GLB1LQ6UWU2 654 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 CYP2U1Q7Z449 544 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 RNF168Q8IYW5 571 aaPredicted RBP6.84□□□□□ -1.31
SNX11-204ENST00000577310 PDCD7Q8N8D1 485 aaKnown RBP6.84□□□□□ -1.31
SNX11-204ENST00000577310 PNPLA1Q8N8W4 532 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 TRAPPC12Q8WVT3 735 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 OSMRQ99650 979 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 TMEM175Q9BSA9 504 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 PI4K2AQ9BTU6 479 aa6.84□□□□□ -1.31
SNX11-204ENST00000577310 APOL6Q9BWW8 343 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms