RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TRIM22Q8IYM9 498 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 TCP11Q8WWU5 503 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 BRF1Q92994 677 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 CEP170P1Q96L14 293 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 MYADMQ96S97 322 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 COLEC11Q9BWP8 271 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 SLC26A6Q9BXS9 759 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 MARCH5Q9NX47 278 aa14.93□□□□□ -0.02
COPS3-214ENST00000577246 MED19A0JLT2 244 aaPredicted RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 ANHXE9PGG2 379 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 RFPL2O75678 378 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 SRGAP2CP0DJJ0 459 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 IFNAR1P17181 557 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 BMP2KLQ5H9B9 411 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 PLA2G4FQ68DD2 849 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 NOTUMQ6P988 496 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 GET4Q7L5D6 327 aaPredicted RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 RNF168Q8IYW5 571 aaPredicted RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 FBXL16Q8N461 479 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 PJA1Q8NG27 643 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 ETNPPLQ8TBG4 499 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 PRPF31Q8WWY3 499 aaKnown RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 GJA10Q969M2 543 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 ZNF707Q96C28 371 aaPredicted RBP14.92□□□□□ -0.02
COPS3-214ENST00000577246 PRKD2Q9BZL6 878 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 NT5C3AQ9H0P0 336 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 DLGAP2Q9P1A6 1054 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 FNIP2Q9P278 1114 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 PCDHA4Q9UN74 947 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 CACNA1AO00555 2505 aa14.92□□□□□ -0.02
COPS3-214ENST00000577246 ARL5CA6NH57 179 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 EDIL3O43854 480 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 TDP2O95551 362 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 HOXA11P31270 313 aaPredicted RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 MLH1P40692 756 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 AFF1P51825 1210 aaKnown RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 DSC1Q08554 894 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 LAMTOR4Q0VGL1 99 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 HTR4Q13639 388 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 USP41Q3LFD5 358 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 UBXN11Q5T124 520 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 BLOC1S2Q6QNY1 142 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 OTUD6AQ7L8S5 288 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 RNF149Q8NC42 400 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 SECISBP2LQ93073 1101 aaKnown RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 YTHDC1Q96MU7 727 aaKnown RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 BCO2Q9BYV7 579 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 TRIM6Q9C030 488 aaPredicted RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 DHX33Q9H6R0 707 aaKnown RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 DLL3Q9NYJ7 618 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 DDX25Q9UHL0 483 aaKnown RBP14.91□□□□□ -0.02
COPS3-214ENST00000577246 IPPQ9Y573 584 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 NUMBLQ9Y6R0 609 aa14.91□□□□□ -0.02
COPS3-214ENST00000577246 SPTLC1O15269 473 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 TGM5O43548 720 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 EFEMP2O95967 443 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 P4HBP07237 508 aaKnown RBP14.9□□□□□ -0.02
COPS3-214ENST00000577246 MAGEA9P43362 315 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 STARD6P59095 220 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 PPP2R5CQ13362 524 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 MXD4Q14582 209 aaPredicted RBP14.9□□□□□ -0.02
COPS3-214ENST00000577246 NTRK3Q16288 839 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 ZNF528Q3MIS6 628 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 GALNT17Q6IS24 598 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 MTSS1LQ765P7 747 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 TAS1R1Q7RTX1 841 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 SMG8Q8ND04 991 aaKnown RBP14.9□□□□□ -0.02
COPS3-214ENST00000577246 FAM20AQ96MK3 541 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 JAKMIP1Q96N16 626 aaKnown RBP14.9□□□□□ -0.02
COPS3-214ENST00000577246 MBOAT7Q96N66 472 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 GAD1Q99259 594 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
COPS3-214ENST00000577246 FBXO4Q9UKT5 387 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 GIT1Q9Y2X7 761 aa14.9□□□□□ -0.02
COPS3-214ENST00000577246 LAMTOR5O43504 91 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 SPATA31D3P0C874 917 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 MYBP10242 640 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 FSHRP23945 695 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 SCNN1GP51170 649 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 NPEPPSP55786 919 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 PFKPQ01813 784 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 PRKCQQ04759 706 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 TFDP1Q14186 410 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 LIN9Q5TKA1 542 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 SPATA31D4Q6ZUB0 917 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 BLIDQ8IZY5 108 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 TMEM143Q96AN5 459 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 MINDY3Q9H8M7 445 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 NCDNQ9UBB6 729 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 ADAM28Q9UKQ2 775 aa14.89□□□□□ -0.03
COPS3-214ENST00000577246 ZMYM2Q9UBW7 1377 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 ZMYND10O75800 440 aa14.88□□□□□ -0.03
COPS3-214ENST00000577246 HNRNPA1P09651 372 aaKnown RBP eCLIP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms