RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 CCDC51Q96ER9 411 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 MTRQ99707 1265 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 ZSWIM4Q9H7M6 989 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 KCNK12Q9HB15 430 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 MAN1C1Q9NR34 630 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 RGL1Q9NZL6 768 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 FBXL21Q9UKT6 434 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 DUSP12Q9UNI6 340 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 IPPQ9Y573 584 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
CDH8-202ENST00000577228 INPPL1O15357 1258 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 TSPAN1O60635 241 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 GLUD1P00367 558 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 AOC1P19801 751 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 AXLP30530 894 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 MLH1P40692 756 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 GLUD2P49448 558 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 CTTNQ14247 550 aaKnown RBP13.16□□□□□ -0.3
CDH8-202ENST00000577228 PCBP1Q15365 356 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDH8-202ENST00000577228 NOTUMQ6P988 496 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 GAD1Q99259 594 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
CDH8-202ENST00000577228 IGSF9Q9P2J2 1179 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
CDH8-202ENST00000577228 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 C2orf16Q68DN1 1984 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 ZBTB39O15060 712 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 TEX28O15482 410 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 NR1I2O75469 434 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
CDH8-202ENST00000577228 GBP2P32456 591 aaPredicted RBP13.15□□□□□ -0.3
CDH8-202ENST00000577228 SCNN1GP51170 649 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 PTENP60484 403 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 DSC1Q08554 894 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
CDH8-202ENST00000577228 SCRN1Q12765 414 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 TFDP1Q14186 410 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
CDH8-202ENST00000577228 CYP26C1Q6V0L0 522 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 FRMD5Q7Z6J6 570 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 SIX5Q8N196 739 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 STAMQ92783 540 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 RXFP1Q9HBX9 757 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 WDR6Q9NNW5 1121 aaKnown RBP13.15□□□□□ -0.3
CDH8-202ENST00000577228 XPNPEP1Q9NQW7 623 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 HES2Q9Y543 173 aa13.15□□□□□ -0.3
CDH8-202ENST00000577228 CLUHO75153 1309 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 PI15O43692 258 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 MYBP10242 640 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 NPR3P17342 541 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 DSG1Q02413 1049 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 SPIRE1Q08AE8 756 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 KIAA0319Q5VV43 1072 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 CCDC105Q8IYK2 499 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 HACE1Q8IYU2 909 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 ZFP42Q96MM3 310 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 COLEC11Q9BWP8 271 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
CDH8-202ENST00000577228 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
CDH8-202ENST00000577228 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 F8W810 466 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 NARSO43776 548 aaKnown RBP13.13□□□□□ -0.31
CDH8-202ENST00000577228 RFPL2O75678 378 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 EFEMP2O95967 443 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 RFX1P22670 979 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 MBTD1Q05BQ5 628 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 CAPSQ13938 189 aa13.13□□□□□ -0.31
CDH8-202ENST00000577228 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
CDH8-202ENST00000577228 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms