RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 IRF2BP1Q8IU81 584 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 C1orf167Q5SNV9 1468 aa19.08■□□□□ 0.64
ATPAF1-214ENST00000576409 RCSD1Q6JBY9 416 aa19.08■□□□□ 0.64
ATPAF1-214ENST00000576409 SCFD1Q8WVM8 642 aa19.08■□□□□ 0.64
ATPAF1-214ENST00000576409 MED15Q96RN5 788 aa19.08■□□□□ 0.64
ATPAF1-214ENST00000576409 MTRQ99707 1265 aa19.08■□□□□ 0.64
ATPAF1-214ENST00000576409 TMBIM4Q9HC24 238 aa19.08■□□□□ 0.64
ATPAF1-214ENST00000576409 MCF2LO15068 1137 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 MARK3P27448 753 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 SESTD1Q86VW0 696 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 RBM15Q96T37 977 aaKnown RBP eCLIP19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 TMEM117Q9H0C3 514 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 MARCOQ9UEW3 520 aaPredicted RBP19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 DDX20Q9UHI6 824 aaKnown RBP19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 DIP2AQ14689 1571 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 EYA4O95677 639 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 LRIG3Q6UXM1 1119 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 CCNYQ8ND76 341 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 FAM161BQ96MY7 647 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 NPHS2Q9NP85 383 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 ARL2BPQ9Y2Y0 163 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 AGTP01019 485 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 ATP6V0A1Q93050 837 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 ACSF2Q96CM8 615 aaPredicted RBP19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 RAVER2Q9HCJ3 691 aaKnown RBP19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 TECPR2O15040 1411 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 TNNC2P02585 160 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 ARSEP51690 589 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 CDR2Q01850 454 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 SCYL1Q96KG9 808 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 CYP4F11Q9HBI6 524 aa19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 DIS3Q9Y2L1 958 aaKnown RBP19.07■□□□□ 0.64
ATPAF1-214ENST00000576409 SLURP2P0DP57 97 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 PSMA2P25787 234 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 IFI35P80217 286 aaPredicted RBP19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 AMPD2Q01433 879 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 FIGNQ5HY92 759 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 ERICH1Q86X53 443 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 RUSC1Q9BVN2 902 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 PPP1R9AQ9ULJ8 1098 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 MAP3K7O43318 606 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 CPP00450 1065 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 PRLRP16471 622 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 MTMR1Q13613 665 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 EDRF1Q3B7T1 1238 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 SH2D4BQ5SQS7 431 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 MCF2L2Q86YR7 1114 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 APOL6Q9BWW8 343 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 ZNF341Q9BYN7 854 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 PHF2O75151 1096 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 DCTN3O75935 186 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 KRT39Q6A163 491 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 OR6B2Q6IFH4 312 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 CCHCR1Q8TD31 782 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 SNF8Q96H20 258 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 PABPC3Q9H361 631 aaKnown RBP19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 TRABDQ9H4I3 376 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 PLEKHG2Q9H7P9 1386 aa19.06■□□□□ 0.64
ATPAF1-214ENST00000576409 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 WDR64B1ANS9 1081 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 HAUS5O94927 633 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 NDUFB10O96000 172 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 CPA2P48052 419 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 FXR2P51116 673 aaKnown RBP eCLIP19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 MEI1Q5TIA1 1274 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 SLC17A8Q8NDX2 589 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 RMDN3Q96TC7 470 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 KIFC3Q9BVG8 833 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 WNT8AQ9H1J5 351 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 INPP5FQ9Y2H2 1132 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 KIF20BQ96Q89 1820 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 STK10O94804 968 aaKnown RBP19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 AGBL2Q5U5Z8 902 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 CYP2W1Q8TAV3 490 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 MPHOSPH6Q99547 160 aaKnown RBP19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 MSTO1Q9BUK6 570 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 COA1Q9GZY4 146 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 PIK3R2O00459 728 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 APBA3O96018 575 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 AARSP49588 968 aaKnown RBP eCLIP19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 KDSRQ06136 332 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 AGR3Q8TD06 166 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 TRIM11Q96F44 468 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 PNMA5Q96PV4 448 aa19.05■□□□□ 0.64
ATPAF1-214ENST00000576409 UBOX5O94941 541 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 ACOT2P49753 483 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 OVGP1Q12889 678 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 IFRD2Q12894 506 aaPredicted RBP19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 SEMA3FQ13275 785 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 MEA1Q16626 185 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 P3H1Q32P28 736 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 CEP55Q53EZ4 464 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 PCGF5Q86SE9 256 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 ZNF507Q8TCN5 953 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 BLOC1S4Q9NUP1 217 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 TNS3Q68CZ2 1445 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 CFAP73A6NFT4 308 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 TJP3O95049 919 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 ITGA8P53708 1063 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 NPEPPSP55786 919 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms