RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 ANO5Q75V66 913 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 ATP11CQ8NB49 1132 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 C11orf70Q9BRQ4 267 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 ANLNQ9NQW6 1124 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 SLC16A3O15427 465 aaKnown RBP13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 TMEM191BP0C7N4 346 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 C12orf60Q5U649 245 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 KCTD6Q8NC69 237 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 SLC26A7Q8TE54 656 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 ASAP2O43150 1006 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 P4HA1P13674 534 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 VHLP40337 213 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 RHOT1Q8IXI2 618 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 NEDD1Q8NHV4 660 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 SEL1LQ9UBV2 794 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 GIPC1O14908 333 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 TNNC2P02585 160 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 BMP3P12645 472 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 PHEXP78562 749 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 DNAJC3Q13217 504 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 KIAA0825Q8IV33 1275 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 FAM217BQ9NTX9 383 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 APEX2Q9UBZ4 518 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 ARHGAP10A1A4S6 786 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L10C9JJH3 530 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 ZBED4O75132 1171 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 KRT38O76015 456 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 TARSP26639 723 aaKnown RBP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 ART3Q13508 389 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 RABGAP1LQ5R372 815 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 CCDC97Q96F63 343 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRAF3IP3Q9Y228 551 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 COMTP21964 271 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 FMO5P49326 533 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 MED21Q13503 144 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 SYDE2Q5VT97 1194 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 FAM84BQ96KN1 310 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 GGA2Q9UJY4 613 aa13.96□□□□□ -0.17
PCDHGB3-201ENST00000576222 PEX3P56589 373 aa13.96□□□□□ -0.18
PCDHGB3-201ENST00000576222 ICA1LQ8NDH6 482 aa13.96□□□□□ -0.18
PCDHGB3-201ENST00000576222 GOLGA8QA0A0J9YX86 632 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 GOLGA8OA6NCC3 632 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 GOLGA8NF8WBI6 632 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 TMCO4Q5TGY1 634 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 NSUN4Q96CB9 384 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 PABPN1LA6NDY0 278 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 GOLGA8RI6L899 631 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 O00370 1275 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 KDSRQ06136 332 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 PKN1Q16512 942 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 CYFIP1Q7L576 1253 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 PPM1NQ8N819 430 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 TTC13Q8NBP0 860 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 PAPOLBQ9NRJ5 636 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 TTLL3Q9Y4R7 772 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 GNAT1P11488 350 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 RARGP13631 454 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 NMT1P30419 496 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 ARSEP51690 589 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 TSSK1BQ9BXA7 367 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 DRC3Q9H069 523 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 RANBP17Q9H2T7 1088 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 HNRNPCP07910 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 ACADSP16219 412 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 SNAP25P60880 206 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 NOP14P78316 857 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 ELF3P78545 371 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 MCF2L2Q86YR7 1114 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 NUDCD3Q8IVD9 361 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 CD302Q8IX05 232 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 PDZD8Q8NEN9 1154 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 WWP1Q9H0M0 922 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 SEPT10Q9P0V9 454 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 UVRAGQ9P2Y5 699 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 HAO1Q9UJM8 370 aa13.95□□□□□ -0.18
PCDHGB3-201ENST00000576222 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 SRRM3A6NNA2 597 aaPredicted RBP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 CYP26A1O43174 497 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 POLGP54098 1239 aaPredicted RBP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 PASD1Q8IV76 773 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 CCDC124Q96CT7 223 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms