RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 PTPROQ16827 1216 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 Q3C1V9 767 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 BRDTQ58F21 947 aaPredicted RBP11.33□□□□□ -0.6
USP43-205ENST00000574408 FMNL3Q8IVF7 1028 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
USP43-205ENST00000574408 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 CCDC102AQ96A19 550 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
USP43-205ENST00000574408 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 FAM53CQ9NYF3 392 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 DAAM1Q9Y4D1 1078 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
USP43-205ENST00000574408 BTNL10A8MVZ5 291 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 H0YCG3 227 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 TNFAIP3P21580 790 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 LIG4P49917 911 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 GALCP54803 685 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
USP43-205ENST00000574408 LY6KQ17RY6 165 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 PPM1KQ8N3J5 372 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 MS4A14Q96JA4 679 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 PCYT2Q99447 389 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 DHX33Q9H6R0 707 aaKnown RBP11.33□□□□□ -0.6
USP43-205ENST00000574408 TUBBP07437 444 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 STAT5BP51692 787 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 HNRNPH2P55795 449 aaKnown RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 KCTD2Q14681 263 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 KRT39Q6A163 491 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 GPD1LQ8N335 351 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 SPATA4Q8NEY3 305 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 FAM213AQ9BRX8 229 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 IGKV6D-21A0A0A0MT36 114 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 ATP8B1O43520 1251 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 ZMYND10O75800 440 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 ABCB4P21439 1286 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 OSBPP22059 807 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 GLRA2P23416 452 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 TCF7P36402 384 aaPredicted RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 CYP24A1Q07973 514 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 STRN3Q13033 797 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 MOGSQ13724 837 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 KIF22Q14807 665 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 BEND6Q5SZJ8 279 aaPredicted RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 MEI1Q5TIA1 1274 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 DEPTORQ8TB45 409 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 SEMA4DQ92854 862 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 FAM84AQ96KN4 292 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 FBXL18Q96ME1 805 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 FUT8Q9BYC5 575 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 PORCNQ9H237 461 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 ARIH2O95376 493 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 GARTP22102 1010 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 PLA2G4AP47712 749 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 FAM160B1Q5W0V3 765 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 USP37Q86T82 979 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 PALB2Q86YC2 1186 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 SLC20A1Q8WUM9 679 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 SEPT1Q8WYJ6 367 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 MMP19Q99542 508 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 MPHOSPH6Q99547 160 aaKnown RBP11.32□□□□□ -0.6
USP43-205ENST00000574408 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 TMEM8AQ9HCN3 771 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 NRBP2Q9NSY0 501 aa11.32□□□□□ -0.6
USP43-205ENST00000574408 TGFB3P10600 412 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 GPS2Q13227 327 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 CCDC70Q6NSX1 233 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 WDR93Q6P2C0 686 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 TAF4BQ92750 862 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
USP43-205ENST00000574408 ZNF408Q9H9D4 720 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 KCNG1Q9UIX4 513 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 INTUQ9ULD6 942 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 PMM2O15305 246 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 MARK3P27448 753 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 MRPS25P82663 173 aaKnown RBP11.31□□□□□ -0.6
USP43-205ENST00000574408 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 CFAP221Q4G0U5 840 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 CTNNBL1Q8WYA6 563 aaPredicted RBP11.31□□□□□ -0.6
USP43-205ENST00000574408 GLG1Q92896 1179 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 FGD4Q96M96 766 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 KREMEN1Q96MU8 473 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 AZI2Q9H6S1 392 aa11.31□□□□□ -0.6
USP43-205ENST00000574408 TAS2R14Q9NYV8 317 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms