RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PODNQ7Z5L7 613 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 WDR11Q9BZH6 1224 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 WNT8AQ9H1J5 351 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 TAOK3Q9H2K8 898 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 MTUS1Q9ULD2 1270 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 LRRC37AA6NMS7 1700 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 TCRBV7S2A1N4TA0A589 114 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 TISP43B9A030 160 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 RASGRF2O14827 1237 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 PPIP5K2O43314 1243 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 RIPK2O43353 540 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 ARP10275 920 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 PIGWQ7Z7B1 504 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 DAW1Q8N136 415 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 MRIQ9BWK5 157 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 CCDC113Q9H0I3 377 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
NUP88-207ENST00000573584 SAMD15Q9P1V8 674 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 LOC102724159A0A0B4J2E5 919 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 ATMINO43313 823 aaPredicted RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 DNAJC8O75937 253 aaPredicted RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 VIMP08670 466 aaKnown RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 RARGP13631 454 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 PWP2Q15269 919 aaKnown RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 CCDC174Q6PII3 467 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 CEP57Q86XR8 500 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 TMEM109Q9BVC6 243 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 STMN4Q9H169 189 aaPredicted RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 TPX2Q9ULW0 747 aaKnown RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 SGPL1O95470 568 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 COILP38432 576 aaPredicted RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 KCNJ1P48048 391 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 TRAF1Q13077 416 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 SLC13A5Q86YT5 568 aaPredicted RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 KAT5Q92993 513 aa16.82■□□□□ 0.28
NUP88-207ENST00000573584 ELAC2Q9BQ52 826 aaKnown RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.82■□□□□ 0.281e-8■■■■■ 38.5
NUP88-207ENST00000573584 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
NUP88-207ENST00000573584 SIPA1L1O43166 1804 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 ANKRD63C9JTQ0 380 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 SPOPO43791 374 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 ALAS1P13196 640 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 IFNAR2P48551 515 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 PDE4CQ08493 712 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 ITIH4Q14624 930 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
NUP88-207ENST00000573584 PREPLQ4J6C6 727 aaPredicted RBP16.81■□□□□ 0.28
NUP88-207ENST00000573584 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 PADI6Q6TGC4 694 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 FAM228AQ86W67 206 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 CCDC25Q86WR0 208 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 MORC4Q8TE76 937 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 ART4Q93070 314 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 P4HA2O15460 535 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 ECE1P42892 770 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 EPC2Q52LR7 807 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 CD101Q93033 1021 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 BTBD6Q96KE9 485 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 CBWD1Q9BRT8 395 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 TEKT3Q9BXF9 490 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 TMEM206Q9H813 350 aa16.81■□□□□ 0.28
NUP88-207ENST00000573584 RARAP10276 462 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 NPR1P16066 1061 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CHRNB2P17787 502 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 AUHQ13825 339 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 CYP1B1Q16678 543 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CCDC38Q502W7 563 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 NOP9Q86U38 636 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 EPS8L1Q8TE68 723 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CCDC134Q9H6E4 229 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 ACP6Q9NPH0 428 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 IPO5O00410 1097 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 VIL1P09327 827 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 GZMAP12544 262 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 PPP1R7Q15435 360 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CYFIP1Q7L576 1253 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 TAOK1Q7L7X3 1001 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CPNE8Q86YQ8 564 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 ZNF564Q8TBZ8 553 aaPredicted RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 NUP85Q9BW27 656 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CXorf56Q9H5V9 222 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 SMCHD1A6NHR9 2005 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CYP26A1O43174 497 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 MTA2O94776 668 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 ALDH1B1P30837 517 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 CALCOCO2Q13137 446 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 NEDD9Q14511 834 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 WLSQ5T9L3 541 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 HIBCHQ6NVY1 386 aaPredicted RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 RUNDC3BQ96NL0 473 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms