RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 POTECB2RU33 542 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 MEIS1O00470 390 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 DAB2IPQ5VWQ8 1189 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 IZUMO3Q5VZ72 239 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 DPF2Q92785 391 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 GYPCP04921 128 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 DDX5P17844 614 aaKnown RBP13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 POLE2P56282 527 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 UGP2Q16851 508 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 MTBPQ96DY7 904 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 ERP44Q9BS26 406 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 HOXC10Q9NYD6 342 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 POTEMA6NI47 508 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 GNGT2O14610 69 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 APOEP02649 317 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 ATP5BP06576 529 aaKnown RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 ADRM1Q16186 407 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 RAD9BQ6WBX8 426 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 PSMC3IPQ9P2W1 217 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 NUB1Q9Y5A7 615 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 A0A0G2JND7 137 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 LPXNO60711 386 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 UCHL3P15374 230 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 SDC4P31431 198 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 HSPA13P48723 471 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 SESTD1Q86VW0 696 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 ICA1LQ8NDH6 482 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 RAB21Q9UL25 225 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 CCT8L1PA6NM43 557 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 SLC16A2P36021 539 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 KLC1Q07866 573 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 STXBP2Q15833 593 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 HIF1AQ16665 826 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 FUT8Q9BYC5 575 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 SALL3Q9BXA9 1300 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 LRRIQ3A6PVS8 624 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 E9PMD0 336 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 ROR1Q01973 937 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 CTTNQ14247 550 aaKnown RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 PTPROQ16827 1216 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 TRPM8Q7Z2W7 1104 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 NUDCD3Q8IVD9 361 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 RIT2Q99578 217 aa13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 MRPL4Q9BYD3 311 aaKnown RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
PCDHGA9-201ENST00000573521 GTPBP10A4D1E9 387 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 GSTA4O15217 222 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 ACADSP16219 412 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 NCF2P19878 526 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 BAG6P46379 1132 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 TTC17Q96AE7 1141 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 COBLO75128 1261 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 GHRP10912 638 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 MORF4L2Q15014 288 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 E2F4Q16254 413 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 PTGISQ16647 500 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 PIK3R2O00459 728 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 HNRNPRO43390 633 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 ABCE1P61221 599 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 PTPAQ15257 358 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZNF699Q32M78 642 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 HEXIM2Q96MH2 286 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 EIF2AK1Q9BQI3 630 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
PCDHGA9-201ENST00000573521 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZC3H11AO75152 810 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 DGAT1O75907 488 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 GNA15P30679 374 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms