RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PGBD4Q96DM1 585 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 TIGD1Q96MW7 591 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 YME1L1Q96TA2 773 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 ACO2Q99798 780 aaKnown RBP18.97■□□□□ 0.63
LITAF-212ENST00000573332 PDZD7Q9H5P4 517 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 PTPRHQ9HD43 1115 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 RNF19AQ9NV58 838 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 TBX20Q9UMR3 447 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 GTPBP6O43824 516 aaPredicted RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 GADD45BO75293 160 aaPredicted RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 PIGRP01833 764 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 MYOGP15173 224 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 LIG1P18858 919 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 COASYQ13057 564 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 ALCAMQ13740 583 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 ATF7IP2Q5U623 682 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 MAP4K3Q8IVH8 894 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 CMTR2Q8IYT2 770 aaKnown RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 SMG8Q8ND04 991 aaKnown RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 ADPGKQ9BRR6 497 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 TARS2Q9BW92 718 aaKnown RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 EIF2AQ9BY44 585 aaKnown RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 BLZF1Q9H2G9 400 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 MRPL44Q9H9J2 332 aaKnown RBP18.96■□□□□ 0.63
LITAF-212ENST00000573332 PTPRSQ13332 1948 aa18.96■□□□□ 0.63
LITAF-212ENST00000573332 LCHNA4D1U4 455 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 CA3P07451 260 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 PROZP22891 400 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 CASP1P29466 404 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 UBE2HP62256 183 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 DCAF4L1Q3SXM0 396 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 EEF1DP3Q658K8 133 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
LITAF-212ENST00000573332 GRAMD1CQ8IYS0 662 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 NKX2-4Q9H2Z4 354 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 SLC28A3Q9HAS3 691 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 UBN1Q9NPG3 1134 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 USP20Q9Y2K6 914 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 IPPQ9Y573 584 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 PCDHB13Q9Y5F0 798 aa18.95■□□□□ 0.62
LITAF-212ENST00000573332 ABLIM1O14639 778 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 KLRC4O43908 158 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 TOM1L1O75674 476 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 TMEM132AQ24JP5 1023 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 AGMOQ6ZNB7 445 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 APBB1IPQ7Z5R6 666 aaPredicted RBP18.94■□□□□ 0.62
LITAF-212ENST00000573332 CDR2LQ86X02 465 aaPredicted RBP18.94■□□□□ 0.62
LITAF-212ENST00000573332 HACE1Q8IYU2 909 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 TRIM6Q9C030 488 aaPredicted RBP18.94■□□□□ 0.62
LITAF-212ENST00000573332 LAMA3Q16787 3333 aa18.94■□□□□ 0.62
LITAF-212ENST00000573332 LINC01553A4QN01 128 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 INPPL1O15357 1258 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 PRPF40AO75400 957 aaKnown RBP18.93■□□□□ 0.62
LITAF-212ENST00000573332 NR1I2O75469 434 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 NPTXRO95502 500 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 FGFR1P11362 822 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 ITGA4P13612 1032 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 TAP1Q03518 808 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 DPYDQ12882 1025 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 BTG3Q14201 252 aaPredicted RBP18.93■□□□□ 0.62
LITAF-212ENST00000573332 ZC2HC1CQ53FD0 456 aaPredicted RBP18.93■□□□□ 0.62
LITAF-212ENST00000573332 CLLU1OSQ5K130 101 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 FAM26FQ5R3K3 315 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 MPZL3Q6UWV2 235 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 STXBP4Q6ZWJ1 553 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 RNF169Q8NCN4 708 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 CASD1Q96PB1 797 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 GBP4Q96PP9 640 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 TBC1D7Q9P0N9 293 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 ZMYM2Q9UBW7 1377 aa18.93■□□□□ 0.62
LITAF-212ENST00000573332 OFD1O75665 1012 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 ARHGEF15O94989 841 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 GCNT3O95395 438 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 MCF2P10911 925 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 IBSPP21815 317 aaPredicted RBP18.92■□□□□ 0.62
LITAF-212ENST00000573332 GATMP50440 423 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 CASP5P51878 434 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 PSMD2Q13200 908 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 L1TD1Q5T7N2 865 aaKnown RBP18.92■□□□□ 0.62
LITAF-212ENST00000573332 PPP2R2DQ66LE6 453 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 GLB1LQ6UWU2 654 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 ABI1Q8IZP0 508 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 FIBCD1Q8N539 461 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 CLP1Q92989 425 aaKnown RBP18.92■□□□□ 0.62
LITAF-212ENST00000573332 LPPQ93052 612 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 SAMD11Q96NU1 681 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 CDT1Q9H211 546 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 NXF3Q9H4D5 531 aaKnown RBP18.92■□□□□ 0.62
LITAF-212ENST00000573332 ZNF576Q9H609 170 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 RSAD1Q9HA92 442 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 EXOC7Q9UPT5 735 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 GIT1Q9Y2X7 761 aa18.92■□□□□ 0.62
LITAF-212ENST00000573332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.91■□□□□ 0.62
LITAF-212ENST00000573332 TBKBP1A7MCY6 615 aa18.91■□□□□ 0.62
LITAF-212ENST00000573332 MEIS3P2A8K0S8 358 aa18.91■□□□□ 0.62
LITAF-212ENST00000573332 HNRNPDLO14979 420 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms