RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 C4orf19Q8IY42 314 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 TDRD5Q8NAT2 981 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 FEZF2Q8TBJ5 459 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 URGCPQ8TCY9 931 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 LXNQ9BS40 222 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 SMOC2Q9H3U7 446 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 RSAD1Q9HA92 442 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 BMP2KQ9NSY1 1161 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 FAM86C1Q9NVL1 165 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 DBR1Q9UK59 544 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 ARID2Q68CP9 1835 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 TBX3O15119 743 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 ASGR2P07307 311 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 YWHABP31946 246 aaKnown RBP16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 EPHA7Q15375 998 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 TMC5Q6UXY8 1006 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 CABP7Q86V35 215 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 PPFIBP1Q86W92 1011 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 ZDHHC14Q8IZN3 488 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 RGL1Q9NZL6 768 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 KANSL3Q9P2N6 904 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 LIMD1Q9UGP4 676 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
NPLOC4-207ENST00000572346 GAS2O43903 313 aaKnown RBP16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 POMCP01189 267 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 ALDH2P05091 517 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 SSBP05455 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 TRAPPC10P48553 1259 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 EMC2Q15006 297 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 RILPL1Q5EBL4 403 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 XKR9Q5GH70 373 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 NCAPH2Q6IBW4 605 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 OTUD6AQ7L8S5 288 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 PLCD3Q8N3E9 789 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 RNF149Q8NC42 400 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 TCP11Q8WWU5 503 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 DYDC2Q96IM9 177 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 KLHL5Q96PQ7 755 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 FAM193BQ96PV7 902 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 IRF2BPLQ9H1B7 796 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 SFXN1Q9H9B4 322 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 STK39Q9UEW8 545 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 FAN1Q9Y2M0 1017 aa16.45■□□□□ 0.22
NPLOC4-207ENST00000572346 C2orf16Q68DN1 1984 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 NRP1O14786 923 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 ZBTB39O15060 712 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 ASAP2O43150 1006 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 LILRB3O75022 631 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 BAG4O95429 457 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 CNPP09543 421 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 NCLP19338 710 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 KLRC2P26717 231 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 MCM7P33993 719 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 CLCN4P51793 760 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 NUBP1P53384 320 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 CYP4A11Q02928 519 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 CTTNQ14247 550 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 ZNF174Q15697 407 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 SMG8Q8ND04 991 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 ATOH1Q92858 354 aaPredicted RBP16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 MTRQ99707 1265 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 EMILIN2Q9BXX0 1053 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 ZSWIM4Q9H7M6 989 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 TCHHQ07283 1943 aa16.44■□□□□ 0.22
NPLOC4-207ENST00000572346 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 H0Y858 1186 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 NEMFO60524 1076 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 ERLIN2O94905 339 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 TMEM105Q8N8V8 129 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 CNNM3Q8NE01 707 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 XPNPEP1Q9NQW7 623 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 MRPL17Q9NRX2 175 aaKnown RBP16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 MARCH5Q9NX47 278 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 IPPQ9Y573 584 aa16.43■□□□□ 0.22
NPLOC4-207ENST00000572346 GALR2O43603 387 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 TSPAN1O60635 241 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 SOD2P04179 222 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 ITGA4P13612 1032 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 PTENP60484 403 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 RESTQ13127 1097 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 CALCRLQ16602 461 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 CCDC149Q6ZUS6 474 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 TPH2Q8IWU9 490 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 SLFN12Q8IYM2 578 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms