RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 GAS2L1Q99501 681 aaPredicted RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 CCSER1Q9C0I3 900 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 TMEM117Q9H0C3 514 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 CSRNP2Q9H175 543 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 NXF3Q9H4D5 531 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 PDZD7Q9H5P4 517 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 PCDHGC5Q9Y5F6 944 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 SRPRBQ9Y5M8 271 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 MTCL1Q9Y4B5 1905 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 PHLPP2Q6ZVD8 1323 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 NPHP3-ACAD11A0A0J9YXS1 232 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 TBKBP1A7MCY6 615 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 FSCN2O14926 492 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 ATMINO43313 823 aaPredicted RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 SLC26A4O43511 780 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 HIP1RO75146 1068 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 OFD1O75665 1012 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 BRD1O95696 1058 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 EOMESO95936 686 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 BMP15O95972 392 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 F13A1P00488 732 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 RB1P06400 928 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 STAG3L1P0CL83 205 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 NCLP19338 710 aaKnown RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 PROZP22891 400 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 MARCKSP29966 332 aaPredicted RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 NPTX2P47972 431 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 DSC1Q08554 894 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PCBP1Q15365 356 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMG6-210ENST00000572205 SPECC1Q5M775 1068 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 AXDND1Q5T1B0 1012 aaPredicted RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 NT5DC1Q5TFE4 455 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 KRT79Q5XKE5 535 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 ADGRD2Q7Z7M1 963 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 CABP7Q86V35 215 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMG6-210ENST00000572205 RNF168Q8IYW5 571 aaPredicted RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 LRRC43Q8N309 656 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 KLHL23Q8NBE8 558 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 SPPL3Q8TCT6 385 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
SMG6-210ENST00000572205 CCDC51Q96ER9 411 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PRIMPOLQ96LW4 560 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 SCLT1Q96NL6 688 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PLVAPQ9BX97 442 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PTPRHQ9HD43 1115 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PLAGL2Q9UPG8 496 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 HES2Q9Y543 173 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 IPPQ9Y573 584 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
SMG6-210ENST00000572205 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 F8W810 466 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 MAP3K7O43318 606 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 FAM189A1O60320 539 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 DDHD2O94830 711 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 GLP2RO95838 553 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 PLA2G4BP0C869 781 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 AXLP30530 894 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 GTF2F1P35269 517 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMG6-210ENST00000572205 LTBRP36941 435 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 RAB27AP51159 221 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 TFF2Q03403 129 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 GPM6BQ13491 265 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 KCNC3Q14003 757 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 TSR1Q2NL82 804 aaKnown RBP9.6□□□□□ -0.87
SMG6-210ENST00000572205 IER5LQ5T953 404 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 TWF2Q6IBS0 349 aaKnown RBP9.6□□□□□ -0.87
SMG6-210ENST00000572205 ZNF280BQ86YH2 543 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 SLC39A11Q8N1S5 342 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 TMEM161BQ8NDZ6 487 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 VN1R2Q8NFZ6 395 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 RAD54LQ92698 747 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 PLIN2Q99541 437 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 REEP2Q9BRK0 252 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 C11orf84Q9BUA3 381 aaPredicted RBP9.6□□□□□ -0.87
SMG6-210ENST00000572205 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 INO80BQ9C086 356 aaPredicted RBP9.6□□□□□ -0.87
SMG6-210ENST00000572205 HAPLN2Q9GZV7 340 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 ZSCAN16Q9H4T2 348 aaPredicted RBP9.6□□□□□ -0.87
SMG6-210ENST00000572205 ALG13Q9NP73 1137 aaKnown RBP9.6□□□□□ -0.87
SMG6-210ENST00000572205 MARCH5Q9NX47 278 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 PCDHB7Q9Y5E2 793 aa9.6□□□□□ -0.87
SMG6-210ENST00000572205 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.59□□□□□ -0.87
SMG6-210ENST00000572205 FRMD3A2A2Y4 597 aa9.59□□□□□ -0.87
SMG6-210ENST00000572205 INO80B-WBP1J3KQ70 363 aa9.59□□□□□ -0.87
SMG6-210ENST00000572205 PTGESO14684 152 aa9.59□□□□□ -0.87
SMG6-210ENST00000572205 TBX10O75333 385 aa9.59□□□□□ -0.87
SMG6-210ENST00000572205 YEATS4O95619 227 aa9.59□□□□□ -0.87
SMG6-210ENST00000572205 PRKCBP05771 671 aa9.59□□□□□ -0.87
SMG6-210ENST00000572205 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms