RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 TBX20Q9UMR3 447 aa11.29□□□□□ -0.6
LITAF-207ENST00000571459 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
LITAF-207ENST00000571459 N4BP3O15049 544 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 KLRC4O43908 158 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 ZNF623O75123 536 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 GCNT3O95395 438 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 NPTXRO95502 500 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 EOMESO95936 686 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 RPN1P04843 607 aaKnown RBP11.28□□□□□ -0.6
LITAF-207ENST00000571459 MYBP10242 640 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 RAB27AP51159 221 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 CASP5P51878 434 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 DPYDQ12882 1025 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 PNOCQ13519 176 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 POSTNQ15063 836 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 EEF1DP3Q658K8 133 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 ZNF598Q86UK7 904 aaKnown RBP11.28□□□□□ -0.6
LITAF-207ENST00000571459 LPPQ93052 612 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 BICD1Q96G01 975 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 RAD9AQ99638 391 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 ACO2Q99798 780 aaKnown RBP11.28□□□□□ -0.6
LITAF-207ENST00000571459 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
LITAF-207ENST00000571459 ST6GALNAC4Q9H4F1 302 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 ELAC1Q9H777 363 aaKnown RBP11.28□□□□□ -0.6
LITAF-207ENST00000571459 MSRAQ9UJ68 235 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 HOOK1Q9UJC3 728 aaKnown RBP11.28□□□□□ -0.6
LITAF-207ENST00000571459 TNFSF13BQ9Y275 285 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 CHD9Q3L8U1 2897 aa11.28□□□□□ -0.6
LITAF-207ENST00000571459 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 PPP1R37O75864 691 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 DGKIO75912 1065 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 PRPF6O94906 941 aaKnown RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 FGFR1P11362 822 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 ATF7P17544 494 aaPredicted RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 ABCD1P33897 745 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 MATR3P43243 847 aaKnown RBP eCLIP11.27□□□□□ -0.61
LITAF-207ENST00000571459 LIG4P49917 911 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 GATMP50440 423 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 SMAD3P84022 425 aaKnown RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 EHHADHQ08426 723 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 FAM26FQ5R3K3 315 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 STXBP4Q6ZWJ1 553 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 MRPL10Q7Z7H8 261 aaKnown RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 ZBTB33Q86T24 672 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 SMG8Q8ND04 991 aaKnown RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 GLIS3Q8NEA6 775 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 KCNN1Q92952 543 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 CCDC47Q96A33 483 aaKnown RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 ACCSQ96QU6 501 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 YME1L1Q96TA2 773 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 APOL6Q9BWW8 343 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 EXOC1Q9NV70 894 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 YBX2Q9Y2T7 364 aaKnown RBP11.27□□□□□ -0.61
LITAF-207ENST00000571459 HES2Q9Y543 173 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 IPPQ9Y573 584 aa11.27□□□□□ -0.61
LITAF-207ENST00000571459 CHD7Q9P2D1 2997 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 FNDC1Q4ZHG4 1894 aaPredicted RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 LCHNA4D1U4 455 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 MEIS3P2A8K0S8 358 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 TOM1L1O75674 476 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 SMC2O95347 1197 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 HARSP12081 509 aaKnown RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 ITGA4P13612 1032 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 KCNA1Q09470 495 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 STK4Q13043 487 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 PSMD2Q13200 908 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 ALCAMQ13740 583 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 RAB30Q15771 203 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 PAN2Q504Q3 1202 aaKnown RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 CLLU1OSQ5K130 101 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 ZPBP2Q6X784 338 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 APBB1IPQ7Z5R6 666 aaPredicted RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 SYCP3Q8IZU3 236 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 IKZF4Q9H2S9 585 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 NKX2-4Q9H2Z4 354 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
LITAF-207ENST00000571459 RNF19AQ9NV58 838 aa11.26□□□□□ -0.61
LITAF-207ENST00000571459 ANKFY1Q9P2R3 1169 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms