RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CFAP47Q6ZTR5 3102 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 BAHCC1Q9P281 2608 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 CCDC196A0A1B0GTZ2 297 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 GOLGA8AA7E2F4 631 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 SPATA31D3P0C874 917 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 MYBP10242 640 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 FSHRP23945 695 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 OR1G1P47890 313 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 RCAN1P53805 252 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 PFKPQ01813 784 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 DSG1Q02413 1049 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
CHMP6-202ENST00000571457 COL9A3Q14050 684 aaPredicted RBP12.71□□□□□ -0.37
CHMP6-202ENST00000571457 ST3GAL2Q16842 350 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 RNF20Q5VTR2 975 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 RSPO2Q6UXX9 243 aaPredicted RBP12.71□□□□□ -0.37
CHMP6-202ENST00000571457 SPATA31D4Q6ZUB0 917 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 MTSS1LQ765P7 747 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 TAS1R1Q7RTX1 841 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 PALB2Q86YC2 1186 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 SLC5A5Q92911 643 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 DDX23Q9BUQ8 820 aaKnown RBP12.71□□□□□ -0.37
CHMP6-202ENST00000571457 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.37
CHMP6-202ENST00000571457 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 ZSCAN32Q9NX65 697 aa12.71□□□□□ -0.37
CHMP6-202ENST00000571457 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.37
CHMP6-202ENST00000571457 MTCL1Q9Y4B5 1905 aaKnown RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 ZFHX4Q86UP3 3567 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 NCAM2O15394 837 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 MSH4O15457 936 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 TGM5O43548 720 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 MAFO75444 373 aaPredicted RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 USP11P51784 963 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 AFF1P51825 1210 aaKnown RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 GPC5P78333 572 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 SNW1Q13573 536 aaKnown RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 UBXN2BQ14CS0 331 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 MLF2Q15773 248 aaPredicted RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 MIER3Q7Z3K6 550 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 SRGAP1Q7Z6B7 1085 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 KSR1Q8IVT5 923 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 EXOC8Q8IYI6 725 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
CHMP6-202ENST00000571457 ZBTB44Q8NCP5 570 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 CCDC136Q96JN2 1154 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 UNC45AQ9H3U1 944 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 IFT122Q9HBG6 1241 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 MARCH5Q9NX47 278 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 FNIP2Q9P278 1114 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 CDH7Q9ULB5 785 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
CHMP6-202ENST00000571457 F5P12259 2224 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 FAM170BA6NMN3 283 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 LRRN2O75325 713 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 ZMYND10O75800 440 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 EFEMP2O95967 443 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 ITGA4P13612 1032 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 NECTIN1Q15223 517 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 USP41Q3LFD5 358 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 SLC44A4Q53GD3 710 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 ZBTB41Q5SVQ8 909 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 LILRA6Q6PI73 481 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 SLC7A3Q8WY07 619 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 FGF14Q92915 247 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 NELL2Q99435 816 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
CHMP6-202ENST00000571457 GMEB2Q9UKD1 530 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 USP18Q9UMW8 372 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
CHMP6-202ENST00000571457 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 DCDC2BA2VCK2 349 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 ARL5CA6NH57 179 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 LILRB5O75023 590 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 PSMD10O75832 226 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 STBD1O95210 358 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 ADRB1P08588 477 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 HNRNPA1P09651 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 CDC27P30260 824 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 HOXA11P31270 313 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 DSC1Q08554 894 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 NCBP1Q09161 790 aaKnown RBP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 UBXN11Q5T124 520 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 PARM1Q6UWI2 310 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 SH2D3AQ9BRG2 576 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 RAB23Q9ULC3 237 aa12.68□□□□□ -0.38
CHMP6-202ENST00000571457 NAP1L2Q9ULW6 460 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms