RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 TAS1R3Q7RTX0 852 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 GPD1LQ8N335 351 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 MRFAP1L1Q96HT8 127 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 CNOT6LQ96LI5 555 aaKnown RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 ACO2Q99798 780 aaKnown RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 ADPGKQ9BRR6 497 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 HSPBP1Q9NZL4 362 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 A0A1B0GUA9 196 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 DCDC2CA8MYV0 355 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 N4BP3O15049 544 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 GPR182O15218 404 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 EXTL3O43909 919 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 STX10O60499 249 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-206ENST00000571263 THPOP40225 353 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDRT1-206ENST00000571263 MCCD1P59942 119 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-206ENST00000571263 RBL2Q08999 1139 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 SNX17Q15036 470 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 SURF1Q15526 300 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 MAN2A1Q16706 1144 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 CEP135Q66GS9 1140 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 CATSPER4Q7RTX7 472 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-206ENST00000571263 IRF2BP1Q8IU81 584 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 CREBRFQ8IUR6 639 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 ZBTB10Q96DT7 871 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
CDRT1-206ENST00000571263 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-206ENST00000571263 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
CDRT1-206ENST00000571263 A0A0B4J269 797 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 ZNF233A6NK53 670 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 ANKRD63C9JTQ0 380 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 MCF2P10911 925 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 COL6A1P12109 1028 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 PROZP22891 400 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 CYP2J2P51589 502 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 COPB1P53618 953 aaKnown RBP13.01□□□□□ -0.33
CDRT1-206ENST00000571263 MCL1Q07820 350 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 TMEM62Q0P6H9 643 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 KRT31Q15323 416 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 FKBP15Q5T1M5 1219 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 NOTUMQ6P988 496 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 NECAB2Q7Z6G3 386 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 FAM126BQ8IXS8 530 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 OSMRQ99650 979 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 MSTO1Q9BUK6 570 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 NOC4LQ9BVI4 516 aaKnown RBP13.01□□□□□ -0.33
CDRT1-206ENST00000571263 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 C11orf49Q9H6J7 331 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 MINDY3Q9H8M7 445 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 TRMT13Q9NUP7 481 aaKnown RBP13.01□□□□□ -0.33
CDRT1-206ENST00000571263 AGO2Q9UKV8 859 aaKnown RBP13.01□□□□□ -0.33
CDRT1-206ENST00000571263 GINS2Q9Y248 185 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDRT1-206ENST00000571263 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
CDRT1-206ENST00000571263 SIP14410 1827 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 A0A1B0GTH6 734 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 PITPNM1O00562 1244 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 OGTO15294 1046 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 B4GALT4O60513 344 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 TSPAN1O60635 241 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 RPS6KA5O75582 802 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 AKAP3O75969 853 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 CD4P01730 458 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 ATP1A3P13637 1013 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 CDC25BP30305 580 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 ADSSP30520 456 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 MGAT3Q09327 533 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
CDRT1-206ENST00000571263 NR1I3Q14994 352 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 SNRNP35Q16560 246 aaKnown RBP13□□□□□ -0.33
CDRT1-206ENST00000571263 AMHR2Q16671 573 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 VWA3BQ502W6 1294 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 SLC39A4Q6P5W5 647 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 TMC2Q8TDI7 906 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 IQCDQ96DY2 449 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 MFSD14AQ96MC6 490 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 CBWD1Q9BRT8 395 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 IFNKQ9P0W0 207 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 EVPLQ92817 2033 aa13□□□□□ -0.33
CDRT1-206ENST00000571263 GOLGA6L6A8MZA4 724 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 P4HA2O15460 535 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
CDRT1-206ENST00000571263 ADCY5O95622 1261 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 CHRNA1P02708 482 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms