RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 MYRFQ9Y2G1 1151 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 DLG5Q8TDM6 1919 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 RIC1Q4ADV7 1423 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 THSD7BQ9C0I4 1608 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 LTBP1Q14766 1721 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 NPEPPSL1A6NEC2 478 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 ERVV-1B6SEH8 477 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 FAM47E-STBD1D6RA91 191 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 PDPK1O15530 556 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 ECE1P42892 770 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 PPP2CBP62714 309 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 PPP2CAP67775 309 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 WDR43Q15061 677 aaKnown RBP eCLIP6.13□□□□□ -1.43
KARSP3-201ENST00000571212 TAF7Q15545 349 aaPredicted RBP6.13□□□□□ -1.43
KARSP3-201ENST00000571212 HLFQ16534 295 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 CD276Q5ZPR3 534 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 KCTD1Q719H9 257 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 MCM10Q7L590 875 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 CKAP2LQ8IYA6 745 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 KLHL36Q8N4N3 616 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 ABHD8Q96I13 439 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 TMPRSS5Q9H3S3 457 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 JADE2Q9NQC1 790 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 DDX21Q9NR30 783 aaKnown RBP eCLIP6.13□□□□□ -1.43
KARSP3-201ENST00000571212 ABT1Q9ULW3 272 aaKnown RBP6.13□□□□□ -1.43
KARSP3-201ENST00000571212 KDM3BQ7LBC6 1761 aa6.13□□□□□ -1.43
KARSP3-201ENST00000571212 ABCC12Q96J65 1359 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 IBTKQ9P2D0 1353 aaPredicted RBP6.12□□□□□ -1.43
KARSP3-201ENST00000571212 IL18BPO95998 194 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 ZNF853P0CG23 659 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 SMAD2Q15796 467 aaKnown RBP6.12□□□□□ -1.43
KARSP3-201ENST00000571212 ARHGEF18Q6ZSZ5 1173 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 USP50Q70EL3 339 aaPredicted RBP6.12□□□□□ -1.43
KARSP3-201ENST00000571212 GPR155Q7Z3F1 870 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 RPGRQ92834 1020 aaKnown RBP6.12□□□□□ -1.43
KARSP3-201ENST00000571212 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 ALG1Q9BT22 464 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 BARX1Q9HBU1 254 aaPredicted RBP6.12□□□□□ -1.43
KARSP3-201ENST00000571212 SLC39A2Q9NP94 309 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 BABAM1Q9NWV8 329 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 ARHGAP20Q9P2F6 1191 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 COL4A5P29400 1685 aa6.12□□□□□ -1.43
KARSP3-201ENST00000571212 MAP3K15Q6ZN16 1313 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 APAF1O14727 1248 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 FBXO21O94952 628 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 KNG1P01042 644 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 ENO2P09104 434 aaPredicted RBP6.11□□□□□ -1.43
KARSP3-201ENST00000571212 EPS15P42566 896 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 EPHA5P54756 1037 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 SSRP1Q08945 709 aaKnown RBP6.11□□□□□ -1.43
KARSP3-201ENST00000571212 DCTN1Q14203 1278 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 SURF1Q15526 300 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 MTERF2Q49AM1 385 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 TRMT2AQ8IZ69 625 aaKnown RBP6.11□□□□□ -1.43
KARSP3-201ENST00000571212 TTC9BQ8N6N2 239 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 CAPNS2Q96L46 248 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 CRAMP1Q96RY5 1269 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
KARSP3-201ENST00000571212 C1QTNF3Q9BXJ4 246 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 VPS33BQ9H267 617 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 ADAM29Q9UKF5 820 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 CASP8AP2Q9UKL3 1982 aa6.11□□□□□ -1.43
KARSP3-201ENST00000571212 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.1□□□□□ -1.43
KARSP3-201ENST00000571212 MATN3O15232 486 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 C6orf222P0C671 652 aaPredicted RBP6.1□□□□□ -1.43
KARSP3-201ENST00000571212 FAM153BP0C7A2 387 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 TNFRSF1AP19438 455 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 MAP2K2P36507 400 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 CST9Q5W186 159 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 KIF6Q6ZMV9 814 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 PLEKHH3Q7Z736 793 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 MTDHQ86UE4 582 aaKnown RBP6.1□□□□□ -1.43
KARSP3-201ENST00000571212 WDR63Q8IWG1 891 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 SCUBE1Q8IWY4 988 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 NIM1KQ8IY84 436 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 RBM17Q96I25 401 aaKnown RBP6.1□□□□□ -1.43
KARSP3-201ENST00000571212 GPR101Q96P66 508 aaPredicted RBP6.1□□□□□ -1.43
KARSP3-201ENST00000571212 CDC6Q99741 560 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 KCND1Q9NSA2 647 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 PTPN22Q9Y2R2 807 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 ANKRD36CQ5JPF3 1778 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 IL16Q14005 1332 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 UBN2Q6ZU65 1347 aa6.1□□□□□ -1.43
KARSP3-201ENST00000571212 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 FAM90A27PA6NNH2 459 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ZNF839A8K0R7 811 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 CHL1O00533 1208 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 KCNK3O14649 394 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 PPIP5K2O43314 1243 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 PYGMP11217 842 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 RGS19P49795 217 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 EPHB4P54760 987 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 RIPK4P57078 832 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 EIF4A1P60842 406 aaKnown RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 PAK1Q13153 545 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 RASGRF1Q13972 1273 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 CDSNQ15517 529 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 PARP10Q53GL7 1025 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms