RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CPB2Q96IY4 423 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 DBR1Q9UK59 544 aaKnown RBP19.56■□□□□ 0.72
CIITA-206ENST00000571190 A0A087WWV3 80 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 ARL5CA6NH57 179 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 BTBD18B2RXH4 712 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 F8W810 466 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 ITGA4P13612 1032 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 KLRC2P26717 231 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 AXLP30530 894 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 MBTD1Q05BQ5 628 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 POU5F1BQ06416 359 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 CAPSQ13938 189 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 MXD4Q14582 209 aaPredicted RBP19.55■□□□□ 0.72
CIITA-206ENST00000571190 TDRD5Q8NAT2 981 aaKnown RBP19.55■□□□□ 0.72
CIITA-206ENST00000571190 CNNM3Q8NE01 707 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 NSUN7Q8NE18 718 aaKnown RBP19.55■□□□□ 0.72
CIITA-206ENST00000571190 WASF1Q92558 559 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 FAM193BQ96PV7 902 aaPredicted RBP19.55■□□□□ 0.72
CIITA-206ENST00000571190 MTMR9Q96QG7 549 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 GAD1Q99259 594 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 EMILIN2Q9BXX0 1053 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 CSRNP2Q9H175 543 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 PCDHA12Q9UN75 941 aa19.55■□□□□ 0.72
CIITA-206ENST00000571190 PRG3Q9Y2Y8 225 aaPredicted RBP19.55■□□□□ 0.72
CIITA-206ENST00000571190 ERLIN2O94905 339 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 SOD2P04179 222 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 GLRA2P23416 452 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 MLH1P40692 756 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 ANKRD1Q15327 319 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 PCBP1Q15365 356 aaKnown RBP eCLIP19.54■□□□□ 0.72
CIITA-206ENST00000571190 GTF3C6Q969F1 213 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 ZFP42Q96MM3 310 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 HERC2P3Q9BVR0 1158 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 TTC12Q9H892 705 aaPredicted RBP19.54■□□□□ 0.72
CIITA-206ENST00000571190 SFXN1Q9H9B4 322 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 UBN1Q9NPG3 1134 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 MRPL17Q9NRX2 175 aaKnown RBP19.54■□□□□ 0.72
CIITA-206ENST00000571190 ANKEF1Q9NU02 776 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 FAM86C1Q9NVL1 165 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 STK39Q9UEW8 545 aa19.54■□□□□ 0.72
CIITA-206ENST00000571190 INO80B-WBP1J3KQ70 363 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 B4GALT5O43286 388 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 JAK2O60674 1132 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 ARF4P18085 180 aaPredicted RBP19.53■□□□□ 0.72
CIITA-206ENST00000571190 RARRES1P49788 294 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 SCNN1GP51170 649 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 ST3GAL1Q11201 340 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 CALCRLQ16602 461 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 KIAA0319Q5VV43 1072 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 NOTUMQ6P988 496 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 PLCD3Q8N3E9 789 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 TMEM105Q8N8V8 129 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 GSTCDQ8NEC7 633 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 PIGOQ8TEQ8 1089 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 RPS6KC1Q96S38 1066 aa19.53■□□□□ 0.72
CIITA-206ENST00000571190 NXF3Q9H4D5 531 aaKnown RBP19.53■□□□□ 0.72
CIITA-206ENST00000571190 C2CD2LO14523 706 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 TEX28O15482 410 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 DGAT1O75907 488 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 TXKP42681 527 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 OR1G1P47890 313 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 TFDP1Q14186 410 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 CDR2LQ86X02 465 aaPredicted RBP19.52■□□□□ 0.72
CIITA-206ENST00000571190 DIS3L2Q8IYB7 885 aaKnown RBP19.52■□□□□ 0.72
CIITA-206ENST00000571190 NFKBIZQ9BYH8 718 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 TMEM60Q9H2L4 133 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 RXFP1Q9HBX9 757 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 BRMS1Q9HCU9 246 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 WDR81Q562E7 1941 aa19.52■□□□□ 0.72
CIITA-206ENST00000571190 N4BP1O75113 896 aaKnown RBP19.51■□□□□ 0.71
CIITA-206ENST00000571190 SPATA31C1P0DKV0 1188 aa19.51■□□□□ 0.71
CIITA-206ENST00000571190 FOSBP53539 338 aa19.51■□□□□ 0.71
CIITA-206ENST00000571190 C15orf39Q6ZRI6 1047 aa19.51■□□□□ 0.71
CIITA-206ENST00000571190 CMASQ8NFW8 434 aaPredicted RBP19.51■□□□□ 0.71
CIITA-206ENST00000571190 APOL6Q9BWW8 343 aa19.51■□□□□ 0.71
CIITA-206ENST00000571190 CHST7Q9NS84 486 aa19.51■□□□□ 0.71
CIITA-206ENST00000571190 GIT1Q9Y2X7 761 aa19.51■□□□□ 0.71
CIITA-206ENST00000571190 POTEMA6NI47 508 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 H0Y858 1186 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 NEMFO60524 1076 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 URODP06132 367 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 AKAP5P24588 427 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 NUBP1P53384 320 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 DSG1Q02413 1049 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 CCDC149Q6ZUS6 474 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 GPR62Q9BZJ7 368 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 POLR3FQ9H1D9 316 aaPredicted RBP19.5■□□□□ 0.71
CIITA-206ENST00000571190 GPRC5CQ9NQ84 441 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 MAN1C1Q9NR34 630 aa19.5■□□□□ 0.71
CIITA-206ENST00000571190 A0A1B0GUA9 196 aa19.49■□□□□ 0.71
CIITA-206ENST00000571190 GALR2O43603 387 aaPredicted RBP19.49■□□□□ 0.71
CIITA-206ENST00000571190 MYBP10242 640 aa19.49■□□□□ 0.71
CIITA-206ENST00000571190 XRCC6P12956 609 aaKnown RBP eCLIP19.49■□□□□ 0.71
CIITA-206ENST00000571190 GLUD2P49448 558 aa19.49■□□□□ 0.71
CIITA-206ENST00000571190 NCBP1Q09161 790 aaKnown RBP19.49■□□□□ 0.71
CIITA-206ENST00000571190 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
CIITA-206ENST00000571190 ACSF2Q96CM8 615 aaPredicted RBP19.49■□□□□ 0.71
CIITA-206ENST00000571190 B3GALT6Q96L58 329 aa19.49■□□□□ 0.71
CIITA-206ENST00000571190 ZDBF2Q9HCK1 2354 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms