RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 BICD1Q96G01 975 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SGCZQ96LD1 299 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 DHRS1Q96LJ7 313 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 UBXN10Q96LJ8 280 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZSCAN31Q96LW9 406 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 COG8Q96MW5 612 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 AIFM3Q96NN9 605 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 NT5C1BQ96P26 610 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MTRQ99707 1265 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 TREX2Q9BQ50 279 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 RSRP1Q9BUV0 290 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 RUSC1Q9BVN2 902 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 BRIP1Q9BX63 1249 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 NT5C1AQ9BXI3 368 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 NAA15Q9BXJ9 866 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 AGXT2Q9BYV1 514 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 NACA2Q9H009 215 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 NAPBQ9H115 298 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 TAOK3Q9H2K8 898 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GJB4Q9NTQ9 266 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 LMBRD1Q9NUN5 540 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 STK32BQ9NY57 414 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZSWIM5Q9P217 1185 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZNF624Q9P2J8 865 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 GMPR2Q9P2T1 348 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 CCDC39Q9UFE4 941 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 DDX20Q9UHI6 824 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZMYM5Q9UJ78 669 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MTUS1Q9ULD2 1270 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PCDHGC3Q9UN70 934 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 COG5Q9UP83 839 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GPR34Q9UPC5 381 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MTMR6Q9Y217 621 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CNPY2Q9Y2B0 182 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 LRCH1Q9Y2L9 728 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PAPPA2Q9BXP8 1791 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 C17orf113A0A1B0GUU1 675 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PTPDC1A2A3K4 754 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 VPS37CA5D8V6 355 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 A8MVJ9 347 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PHF20L1A8MW92 1017 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 B4E171 279 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 M0R2N6 131 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 TERTO14746 1132 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 OPLAHO14841 1288 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 STX6O43752 255 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 NMT2O60551 498 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PFKFB2O60825 505 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ADAMTS4O75173 837 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PRDM1O75626 825 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 FGFR1OPO95684 399 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 HSPA4LO95757 839 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 RHOXF2BP0C7M4 288 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 HSPA1AP0DMV8 641 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 HSPA1BP0DMV9 641 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZSCAN22P10073 491 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 ARAFP10398 606 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 MYCLP12524 364 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 XRCC6P12956 609 aaKnown RBP eCLIP3.87□□□□□ -1.79
SMG6-208ENST00000570874 TNNT1P13805 278 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 FDPSP14324 419 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 IL1R1P14778 569 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 AKR1B1P15121 316 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 NPR1P16066 1061 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 GNAT2P19087 354 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LPOP22079 712 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 IGFBP4P22692 258 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 EIF4A3P38919 411 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 SKIV2L2P42285 1042 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 BAG6P46379 1132 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 NPTX2P47972 431 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 SCNN1DP51172 638 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 KIF11P52732 1056 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PDE4BQ07343 736 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CDC16Q13042 620 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 TERF2Q15554 542 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ALX1Q15699 326 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 PKN1Q16512 942 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 MEA1Q16626 185 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 GEN1Q17RS7 908 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LONRF2Q1L5Z9 754 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 WSCD2Q2TBF2 565 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LRRFIP1Q32MZ4 808 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 FAM47AQ5JRC9 791 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 AKNAD1Q5T1N1 836 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 C6orf118Q5T5N4 469 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 HEATR6Q6AI08 1181 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 C16orf46Q6P387 395 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CNNM4Q6P4Q7 775 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 BNC2Q6ZN30 1099 aaPredicted RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 CCDC81Q6ZN84 652 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CCDC149Q6ZUS6 474 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 C15orf52Q6ZUT6 534 aaKnown RBP3.87□□□□□ -1.79
SMG6-208ENST00000570874 LHFPL2Q6ZUX7 228 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 CCDC186Q7Z3E2 898 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZNF804AQ7Z570 1209 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 ZER1Q7Z7L7 766 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 TRIM74Q86UV6 250 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 TRIM73Q86UV7 250 aa3.87□□□□□ -1.79
SMG6-208ENST00000570874 LRRTM3Q86VH5 581 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms