RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	NT5DC1	Q5TFE4	455 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	ATF7IP2	Q5U623	682 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	CRIPAK	Q8N1N5	446 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	SLC17A8	Q8NDX2	589 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	ENGASE	Q8NFI3	743 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	CCDC34	Q96HJ3	373 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	LRCH3	Q96II8	777 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	FIZ1	Q96SL8	496 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	YME1L1	Q96TA2	773 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	RAD9A	Q99638	391 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	MRPL4	Q9BYD3	311 aa	Known RBP	12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	TRIM6	Q9C030	488 aa	Predicted RBP	12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	PDZD7	Q9H5P4	517 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	ELAC1	Q9H777	363 aa	Known RBP	12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	OLFML3	Q9NRN5	406 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	TMEM161A	Q9NX61	479 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	YBX2	Q9Y2T7	364 aa	Known RBP	12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	INSL6	Q9Y581	213 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	PCDHB2	Q9Y5E7	798 aa		12.71	□□□□□ -0.37
ATP2A3-208	ENST00000570845	SCN1A	P35498	2009 aa		12.71	□□□□□ -0.38
ATP2A3-208	ENST00000570845	SZT2	Q5T011	3432 aa		12.71	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MYO7A	Q13402	2215 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	VWA8	A3KMH1	1905 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	NR1I2	O75469	434 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	DGKI	O75912	1065 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	EOMES	O95936	686 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MYL1	P05976	194 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	FGFR1	P11362	822 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ATF7	P17544	494 aa	Predicted RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ABCD1	P33897	745 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	GATM	P50440	423 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	GTF2B	Q00403	316 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	KANK3	Q6NY19	840 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	UNC13D	Q70J99	1090 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ZNF598	Q86UK7	904 aa	Known RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	LPP	Q93052	612 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	HPS3	Q969F9	1004 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	BICD1	Q96G01	975 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ACO2	Q99798	780 aa	Known RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ADPGK	Q9BRR6	497 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	TARS2	Q9BW92	718 aa	Known RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	EIF2A	Q9BY44	585 aa	Known RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	NKX2-4	Q9H2Z4	354 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ST6GALNAC4	Q9H4F1	302 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	TBX20	Q9UMR3	447 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	TNFSF13B	Q9Y275	285 aa		12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MTCL1	Q9Y4B5	1905 aa	Known RBP	12.7	□□□□□ -0.38
ATP2A3-208	ENST00000570845	REV3L	O60673	3130 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	PVALEF	A0A1B0GWK0	134 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	LCHN	A4D1U4	455 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ZNF623	O75123	536 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	GCNT3	O95395	438 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	CA3	P07451	260 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MYB	P10242	640 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	CASP5	P51878	434 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	POSTN	Q15063	836 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	DCAF4L1	Q3SXM0	396 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ZNF568	Q3ZCX4	644 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	PAN2	Q504Q3	1202 aa	Known RBP	12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	EEF1DP3	Q658K8	133 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ZNF720	Q7Z2F6	126 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	SMG8	Q8ND04	991 aa	Known RBP	12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	KCNN1	Q92952	543 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	TIFA	Q96CG3	184 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	HVCN1	Q96D96	273 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	PGBD4	Q96DM1	585 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	TIGD1	Q96MW7	591 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	APOL6	Q9BWW8	343 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	FGFBP2	Q9BYJ0	223 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	EXOC1	Q9NV70	894 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ANKFY1	Q9P2R3	1169 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	HES2	Q9Y543	173 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	IPP	Q9Y573	584 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	CDH23	Q9H251	3354 aa		12.69	□□□□□ -0.38
ATP2A3-208	ENST00000570845	TBKBP1	A7MCY6	615 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MEIS3P2	A8K0S8	358 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	GOLGA6L22	H0YM25	854 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	HNRNPDL	O14979	420 aa	Known RBP	12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	HOXA2	O43364	376 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	KLRC4	O43908	158 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	KIN	O60870	393 aa	Known RBP	12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	PPP1R37	O75864	691 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	RPN1	P04843	607 aa	Known RBP	12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ITGA4	P13612	1032 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MATR3	P43243	847 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	LIG4	P49917	911 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	EHHADH	Q08426	723 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	DPYD	Q12882	1025 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	PNOC	Q13519	176 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ALCAM	Q13740	583 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	BTG3	Q14201	252 aa	Predicted RBP	12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	KMT5B	Q4FZB7	885 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	CLLU1OS	Q5K130	101 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	FAM26F	Q5R3K3	315 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	L1TD1	Q5T7N2	865 aa	Known RBP	12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	PPP2R2D	Q66LE6	453 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	MPZL3	Q6UWV2	235 aa		12.68	□□□□□ -0.38
ATP2A3-208	ENST00000570845	ZPBP2	Q6X784	338 aa		12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms