RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 AFF1P51825 1210 aaKnown RBP16.74■□□□□ 0.27
RAB40B-203ENST00000570676 KRT17Q04695 432 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 PTGDRQ13258 359 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 SLC39A14Q15043 492 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 PTPAQ15257 358 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 LINC00301Q8NCQ3 95 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 LEO1Q8WVC0 666 aaPredicted RBP16.74■□□□□ 0.27
RAB40B-203ENST00000570676 CPB2Q96IY4 423 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 ZBP1Q9H171 429 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 GDPD2Q9HCC8 539 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 RCOR1Q9UKL0 485 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 IPPQ9Y573 584 aa16.74■□□□□ 0.27
RAB40B-203ENST00000570676 INO80B-WBP1J3KQ70 363 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 INPPL1O15357 1258 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 GALTP07902 379 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 COL9A1P20849 921 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 AXLP30530 894 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 ALDH7A1P49419 539 aaKnown RBP16.73■□□□□ 0.27
RAB40B-203ENST00000570676 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAB40B-203ENST00000570676 TMEM184AQ6ZMB5 413 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 ZNF280BQ86YH2 543 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 ERMNQ8TAM6 284 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 CCDC51Q96ER9 411 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 TMEM169Q96HH4 297 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 IGSF21Q96ID5 467 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 VN1R3Q9BXE9 311 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 USP15Q9Y4E8 981 aaPredicted RBP16.73■□□□□ 0.27
RAB40B-203ENST00000570676 DENND4AQ7Z401 1863 aa16.73■□□□□ 0.27
RAB40B-203ENST00000570676 C2orf71A6NGG8 1288 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 SPTLC2O15270 562 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 B4GALT5O43286 388 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 DDHD2O94830 711 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 ARF4P18085 180 aaPredicted RBP16.72■□□□□ 0.27
RAB40B-203ENST00000570676 SLC11A1P49279 550 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 ATP2C1P98194 919 aaPredicted RBP16.72■□□□□ 0.27
RAB40B-203ENST00000570676 SMC1AQ14683 1233 aaKnown RBP16.72■□□□□ 0.27
RAB40B-203ENST00000570676 ECM1Q16610 540 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 HAUS3Q68CZ6 603 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 CDCA2Q69YH5 1023 aaPredicted RBP16.72■□□□□ 0.27
RAB40B-203ENST00000570676 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 TMC7Q7Z402 723 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 CNNM3Q8NE01 707 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 MCPH1Q8NEM0 835 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 BSNDQ8WZ55 320 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 NACC1Q96RE7 527 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 GBP3Q9H0R5 595 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 RAPGEFL1Q9UHV5 662 aa16.72■□□□□ 0.27
RAB40B-203ENST00000570676 CARNS1A5YM72 827 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 LAD1O00515 517 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 MUTP22033 750 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
RAB40B-203ENST00000570676 RNASELQ05823 741 aaKnown RBP16.71■□□□□ 0.27
RAB40B-203ENST00000570676 ANKRD54Q6NXT1 300 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 MAEAQ7L5Y9 396 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 DDX53Q86TM3 631 aaKnown RBP16.71■□□□□ 0.27
RAB40B-203ENST00000570676 IGSF22Q8N9C0 903 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 SUSD6Q92537 303 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 POP1Q99575 1024 aaKnown RBP16.71■□□□□ 0.27
RAB40B-203ENST00000570676 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 NXF3Q9H4D5 531 aaKnown RBP16.71■□□□□ 0.27
RAB40B-203ENST00000570676 HES2Q9Y543 173 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 PLXNA3P51805 1871 aa16.71■□□□□ 0.27
RAB40B-203ENST00000570676 TCHHQ07283 1943 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 FAM86C2PA6NEL3 165 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 LRRIQ4A6NIV6 560 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 GPR37L1O60883 481 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 CLASP2O75122 1294 aaKnown RBP16.7■□□□□ 0.26
RAB40B-203ENST00000570676 PPP6R2O75170 966 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 SRGAP2BP0DMP2 458 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 CTSAP10619 480 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 ITGA4P13612 1032 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 MLH1P40692 756 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 ME1P48163 572 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 TMEM31Q5JXX7 168 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 LLGL2Q6P1M3 1020 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 SYCE2Q6PIF2 218 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 PADI6Q6TGC4 694 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-203ENST00000570676 VPS52Q8N1B4 723 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 MRPL43Q8N983 215 aaKnown RBP16.7■□□□□ 0.26
RAB40B-203ENST00000570676 AUTS2Q8WXX7 1259 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 TMEM175Q9BSA9 504 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 S1PR5Q9H228 398 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 HCFC2Q9Y5Z7 792 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
RAB40B-203ENST00000570676 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-203ENST00000570676 ZMYM2Q9UBW7 1377 aa16.69■□□□□ 0.26
RAB40B-203ENST00000570676 ARHGEF35A5YM69 484 aa16.69■□□□□ 0.26
RAB40B-203ENST00000570676 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
RAB40B-203ENST00000570676 DCXO43602 365 aa16.69■□□□□ 0.26
RAB40B-203ENST00000570676 POMCP01189 267 aa16.69■□□□□ 0.26
RAB40B-203ENST00000570676 CYP11B2P19099 503 aa16.69■□□□□ 0.26
RAB40B-203ENST00000570676 CCT6AP40227 531 aaKnown RBP16.69■□□□□ 0.26
RAB40B-203ENST00000570676 PRPHP41219 470 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 709.2 ms