RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 ATG2AQ2TAZ0 1938 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 NCOR1O75376 2440 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 CCDC169A6NNP5 214 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 K7ERI5 159 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 N4BP3O15049 544 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 EDN1P05305 212 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 IRS1P35568 1242 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 PBX3P40426 434 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 ALDH7A1P49419 539 aaKnown RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 AFF1P51825 1210 aaKnown RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 BCAR1P56945 870 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 AAK1Q2M2I8 961 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 ARSHQ5FYA8 562 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 SPECC1Q5M775 1068 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 HACE1Q8IYU2 909 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 SLC39A11Q8N1S5 342 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 URGCPQ8TCY9 931 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 SPIRE2Q8WWL2 714 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 RAD54LQ92698 747 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 ZNF396Q96N95 335 aaPredicted RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 CLIC6Q96NY7 704 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 NXF3Q9H4D5 531 aaKnown RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 PDZD7Q9H5P4 517 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 NRDE2Q9H7Z3 1164 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 KMT5AQ9NQR1 393 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
SMG6-206ENST00000570668 GIT1Q9Y2X7 761 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 HES2Q9Y543 173 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 ZMYM2Q9UBW7 1377 aa12.28□□□□□ -0.44
SMG6-206ENST00000570668 ARL5CA6NH57 179 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 SFI1A8K8P3 1242 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 NCK2O43639 380 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMG6-206ENST00000570668 NPTXRO95502 500 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 F13A1P00488 732 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 GALTP07902 379 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 PLS3P13797 630 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 DDIT3P35638 169 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 TFF2Q03403 129 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 KRT17Q04695 432 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 RNASELQ05823 741 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 RAD51AP2Q09MP3 1159 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 STK38Q15208 465 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 NT5DC1Q5TFE4 455 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 PDE12Q6L8Q7 609 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 ZNF280BQ86YH2 543 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 KRI1Q8N9T8 703 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 LARP4BQ92615 738 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 SYMPKQ92797 1274 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 KCNN1Q92952 543 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 PABPC5Q96DU9 382 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 GAD1Q99259 594 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 ADPGKQ9BRR6 497 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 UBE2ZQ9H832 354 aaPredicted RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 TLR9Q9NR96 1032 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 LARSQ9P2J5 1176 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 TFIP11Q9UBB9 837 aaKnown RBP12.27□□□□□ -0.45
SMG6-206ENST00000570668 CCDC39Q9UFE4 941 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 MUC3AQ02505 3323 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 MYH15Q9Y2K3 1946 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 MYH11P35749 1972 aa12.27□□□□□ -0.45
SMG6-206ENST00000570668 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 NT5C1B-RDH14C9J2C7 533 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 FSCN2O14926 492 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 SPTLC2O15270 562 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 SLC16A4O15374 487 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 B4GALT3O60512 393 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 PPP6R2O75170 966 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 DDHD2O94830 711 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 CSPG5O95196 566 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 YEATS4O95619 227 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 POMCP01189 267 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 LIG1P18858 919 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 TXLNAP40222 546 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 MLH1P40692 756 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 SMTNP53814 917 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 ERVFC1P60507 584 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 HYAL1Q12794 435 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 PKP1Q13835 747 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 MCM6Q14566 821 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 TMEM132AQ24JP5 1023 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 CTC1Q2NKJ3 1217 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 ATF7IP2Q5U623 682 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
SMG6-206ENST00000570668 EEF1DP3Q658K8 133 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 ATL3Q6DD88 541 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 TAS1R3Q7RTX0 852 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 GPBP1Q86WP2 473 aa12.26□□□□□ -0.45
SMG6-206ENST00000570668 TMEM173Q86WV6 379 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms