RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 FERMT3Q86UX7 667 aa23.48■■□□□ 1.35
PKD1-240ENST00000570253 LARP6Q9BRS8 491 aaKnown RBP23.48■■□□□ 1.35
PKD1-240ENST00000570253 VN1R3Q9BXE9 311 aa23.48■■□□□ 1.35
PKD1-240ENST00000570253 MAN1C1Q9NR34 630 aa23.48■■□□□ 1.35
PKD1-240ENST00000570253 IGSF9Q9P2J2 1179 aa23.48■■□□□ 1.35
PKD1-240ENST00000570253 PROB1E7EW31 1015 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 GLUD1P00367 558 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 CMASQ8NFW8 434 aaPredicted RBP23.47■■□□□ 1.35
PKD1-240ENST00000570253 RPS6KC1Q96S38 1066 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 RTP3Q9BQQ7 232 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 SMOC2Q9H3U7 446 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 MINDY3Q9H8M7 445 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 DUSP12Q9UNI6 340 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 STK36Q9NRP7 1315 aa23.47■■□□□ 1.35
PKD1-240ENST00000570253 INO80B-WBP1J3KQ70 363 aa23.46■■□□□ 1.35
PKD1-240ENST00000570253 HOXA11P31270 313 aaPredicted RBP23.46■■□□□ 1.35
PKD1-240ENST00000570253 GBP2P32456 591 aaPredicted RBP23.46■■□□□ 1.35
PKD1-240ENST00000570253 UBXN11Q5T124 520 aa23.46■■□□□ 1.35
PKD1-240ENST00000570253 TPH2Q8IWU9 490 aa23.46■■□□□ 1.35
PKD1-240ENST00000570253 ZNF579Q8NAF0 562 aaKnown RBP23.46■■□□□ 1.35
PKD1-240ENST00000570253 DYDC2Q96IM9 177 aa23.46■■□□□ 1.35
PKD1-240ENST00000570253 ZFHX2Q9C0A1 2572 aaPredicted RBP23.46■■□□□ 1.35
PKD1-240ENST00000570253 IPPQ9Y573 584 aa23.46■■□□□ 1.35
PKD1-240ENST00000570253 NBL1P41271 181 aa23.45■■□□□ 1.34
PKD1-240ENST00000570253 CYP4A11Q02928 519 aa23.45■■□□□ 1.34
PKD1-240ENST00000570253 CTTNQ14247 550 aaKnown RBP23.45■■□□□ 1.34
PKD1-240ENST00000570253 POTEDQ86YR6 584 aa23.45■■□□□ 1.34
PKD1-240ENST00000570253 COLEC11Q9BWP8 271 aa23.45■■□□□ 1.34
PKD1-240ENST00000570253 KCNK12Q9HB15 430 aa23.45■■□□□ 1.34
PKD1-240ENST00000570253 RGL1Q9NZL6 768 aa23.45■■□□□ 1.34
PKD1-240ENST00000570253 WRAP73Q9P2S5 460 aaPredicted RBP23.45■■□□□ 1.34
PKD1-240ENST00000570253 CCDC195A0A1B0GUA6 201 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 ARL5CA6NH57 179 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 STK25O00506 426 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 B4GALT3O60512 393 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 LILRB3O75022 631 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 MLH1P40692 756 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 PTENP60484 403 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 CREMQ03060 361 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 COLGALT2Q8IYK4 626 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 CSRNP2Q9H175 543 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 PIDD1Q9HB75 910 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.44■■□□□ 1.34
PKD1-240ENST00000570253 GIT1Q9Y2X7 761 aa23.44■■□□□ 1.34
PKD1-240ENST00000570253 USP34Q70CQ2 3546 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 ARID2Q68CP9 1835 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 INPPL1O15357 1258 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 TSPAN1O60635 241 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 DGAT1O75907 488 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 AOC1P19801 751 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 AFF1P51825 1210 aaKnown RBP23.43■■□□□ 1.34
PKD1-240ENST00000570253 POU5F1BQ06416 359 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 SCRN1Q12765 414 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 SMG8Q8ND04 991 aaKnown RBP23.43■■□□□ 1.34
PKD1-240ENST00000570253 HDAC7Q8WUI4 952 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 HAS1Q92839 578 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 NKD2Q969F2 451 aaPredicted RBP23.43■■□□□ 1.34
PKD1-240ENST00000570253 SNX27Q96L92 541 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 GAD1Q99259 594 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 APOL6Q9BWW8 343 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 RHOBTB2Q9BYZ6 727 aa23.43■■□□□ 1.34
PKD1-240ENST00000570253 TDRD15B5MCY1 1934 aaKnown RBP23.43■■□□□ 1.34
PKD1-240ENST00000570253 CLUHO75153 1309 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 C2orf16Q68DN1 1984 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 TEX28O15482 410 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 KRT2P35908 639 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 SCNN1GP51170 649 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 ANKRD1Q15327 319 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 SIX5Q8N196 739 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 SMG7Q92540 1137 aaKnown RBP23.42■■□□□ 1.34
PKD1-240ENST00000570253 NXPE3Q969Y0 559 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 CPB2Q96IY4 423 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 EIF2AQ9BY44 585 aaKnown RBP23.42■■□□□ 1.34
PKD1-240ENST00000570253 PLEKHA4Q9H4M7 779 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 WDR6Q9NNW5 1121 aaKnown RBP23.42■■□□□ 1.34
PKD1-240ENST00000570253 MARCH5Q9NX47 278 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 PCDHA12Q9UN75 941 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 PLXNA3P51805 1871 aa23.42■■□□□ 1.34
PKD1-240ENST00000570253 PRR23AA6NEV1 266 aa23.41■■□□□ 1.34
PKD1-240ENST00000570253 C1RP00736 705 aa23.41■■□□□ 1.34
PKD1-240ENST00000570253 DSG1Q02413 1049 aa23.41■■□□□ 1.34
PKD1-240ENST00000570253 USP41Q3LFD5 358 aa23.41■■□□□ 1.34
PKD1-240ENST00000570253 EIF2AK1Q9BQI3 630 aaKnown RBP23.41■■□□□ 1.34
PKD1-240ENST00000570253 RXFP1Q9HBX9 757 aa23.41■■□□□ 1.34
PKD1-240ENST00000570253 ANKEF1Q9NU02 776 aa23.41■■□□□ 1.34
PKD1-240ENST00000570253 ORC3Q9UBD5 711 aaPredicted RBP23.41■■□□□ 1.34
PKD1-240ENST00000570253 DSC1Q08554 894 aa23.4■■□□□ 1.34
PKD1-240ENST00000570253 CALCRLQ16602 461 aa23.4■■□□□ 1.34
PKD1-240ENST00000570253 CWF19L1Q69YN2 538 aaKnown RBP23.4■■□□□ 1.34
PKD1-240ENST00000570253 IFNLR1Q8IU57 520 aaPredicted RBP23.4■■□□□ 1.34
PKD1-240ENST00000570253 PFKFB2O60825 505 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 SLITRK3O94933 977 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 FOXK2Q01167 660 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 GRIK3Q13003 919 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 KIAA0319Q5VV43 1072 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 SLC27A1Q6PCB7 646 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 ASCL5Q7RTU5 278 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 FRMD5Q7Z6J6 570 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 CCDC105Q8IYK2 499 aa23.39■■□□□ 1.33
PKD1-240ENST00000570253 GPR65Q8IYL9 337 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms