RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRMT7Q9NVM4 692 aaPredicted RBP18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 DNAJB4Q9UDY4 337 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 INPP5FQ9Y2H2 1132 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 GIT1Q9Y2X7 761 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 NT5C1B-RDH14C9J2C7 533 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 DDHD2O94830 711 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 EFEMP2O95967 443 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ITGA4P13612 1032 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PTGDRQ13258 359 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 LONRF3Q496Y0 759 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 HERC4Q5GLZ8 1057 aaPredicted RBP18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PADI6Q6TGC4 694 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 HACE1Q8IYU2 909 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 BCL7CQ8WUZ0 217 aaPredicted RBP18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 TBC1D32Q96NH3 1257 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PHF7Q9BWX1 381 aaPredicted RBP18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 VN1R3Q9BXE9 311 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 LRWD1Q9UFC0 647 aa18.93■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ARHGEF35A5YM69 484 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ARL5CA6NH57 179 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PRR33A8MZF0 331 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CLASP2O75122 1294 aaKnown RBP18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ALDH2P05091 517 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 NAMPTP43490 491 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 AFF1P51825 1210 aaKnown RBP18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 RBM10P98175 930 aaKnown RBP18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 RILPL1Q5EBL4 403 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 COLGALT2Q8IYK4 626 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 RNF168Q8IYW5 571 aaPredicted RBP18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 KCTD17Q8N5Z5 321 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CPB2Q96IY4 423 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 GPRC5CQ9NQ84 441 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PCDHB6Q9Y5E3 794 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 HCFC2Q9Y5Z7 792 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 DENND4AQ7Z401 1863 aa18.92■□□□□ 0.62
MAP1LC3B-208ENST00000570189 A0A087WWV3 80 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 LRRIQ4A6NIV6 560 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CD2BP2O95400 341 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CXCL14O95715 111 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CCT6AP40227 531 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ITIH3Q06033 890 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 NBR1Q14596 966 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PPP2R5AQ15172 486 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ECM1Q16610 540 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 TPRNQ4KMQ1 711 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ZBTB8OSQ8IWT0 167 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 FAM193BQ96PV7 902 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CCDC113Q9H0I3 377 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 DZANK1Q9NVP4 752 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 MYH11P35749 1972 aa18.91■□□□□ 0.62
MAP1LC3B-208ENST00000570189 MTCL1Q9Y4B5 1905 aaKnown RBP18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 NRP1O14786 923 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 B4GALT5O43286 388 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 LILRB3O75022 631 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PTPN14Q15678 1187 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 GPR65Q8IYL9 337 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 GSTCDQ8NEC7 633 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 BSNDQ8WZ55 320 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 KIFAP3Q92845 792 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 TRIM6Q9C030 488 aaPredicted RBP18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 NXF3Q9H4D5 531 aaKnown RBP18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 FAN1Q9Y2M0 1017 aa18.9■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 ACKR2O00590 384 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 C1RP00736 705 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 POMCP01189 267 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 SOD2P04179 222 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 MLH1P40692 756 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 EFNA5P52803 228 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 ATP2C1P98194 919 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 RNF135Q8IUD6 432 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 SLC22A17Q8WUG5 538 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 NECTIN4Q96NY8 510 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 GAD1Q99259 594 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 GBP3Q9H0R5 595 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 BHMT2Q9H2M3 363 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 ADAM7Q9H2U9 754 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 MARCH5Q9NX47 278 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 HES2Q9Y543 173 aa18.89■□□□□ 0.61
MAP1LC3B-208ENST00000570189 TRIP11Q15643 1979 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 TECTAO75443 2155 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 N4BP3O15049 544 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 GJB2P29033 226 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 GRIK3Q13003 919 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 IL17AQ16552 155 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 MAPK6Q16659 721 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 HYIQ5T013 277 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 ARL6IP4Q66PJ3 421 aaKnown RBP18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 SNX29Q8TEQ0 813 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 ZFP42Q96MM3 310 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 MMTAG2Q9BU76 263 aaKnown RBP18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 DDX19AQ9NUU7 478 aaKnown RBP18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 MIOSQ9NXC5 875 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 KIAA1024Q9UPX6 916 aa18.88■□□□□ 0.61
MAP1LC3B-208ENST00000570189 SSX2IPQ9Y2D8 614 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms