RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 FAM133AQ8N9E0 248 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 NOA1Q8NC60 698 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 LMBR1Q8WVP7 490 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 DCPSQ96C86 337 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MMS19Q96T76 1030 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 TLR10Q9BXR5 811 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 FUT8Q9BYC5 575 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 INTS2Q9H0H0 1204 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 EPC1Q9H2F5 836 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 IKZF4Q9H2S9 585 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 TAF1DQ9H5J8 278 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MLXIPQ9HAP2 919 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 JPH1Q9HDC5 661 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 HSPBP1Q9NZL4 362 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 PKD2L1Q9P0L9 805 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 GCNT4Q9P109 453 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 GABBR1Q9UBS5 961 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 SLC9A2Q9UBY0 812 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 APEX2Q9UBZ4 518 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 DNAJC12Q9UKB3 198 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 L1RE1Q9UN81 338 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 KCNH4Q9UQ05 1017 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 HYOU1Q9Y4L1 999 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 STYXL1Q9Y6J8 313 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 RLFQ13129 1914 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 SYNGAP1Q96PV0 1343 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SCN4AP35499 1836 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 GRID2IPA4D2P6 1211 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 ADM5C9JUS6 153 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 F8VZ95 297 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 K7ENM7 598 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 DDX3XO00571 662 aaKnown RBP eCLIP5.84□□□□□ -1.472e-15■■□□□ 11.5
SF3B3-213ENST00000569687 SLC16A4O15374 487 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SRGAP2O75044 1071 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SLC25A27O95847 323 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SUPT20HL2P0C7V6 817 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 HOXB3P14651 431 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 KLRC1P26715 233 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 ADSSP30520 456 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 ARL2P36404 184 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PLA2G4AP47712 749 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 IREB2P48200 963 aaKnown RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CYP2J2P51589 502 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 GPC3P51654 580 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 HADHBP55084 474 aaKnown RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PEX3P56589 373 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CBX1P83916 185 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SP2Q02086 613 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 GABPB1Q06547 395 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PPP3CAQ08209 521 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 VGLL4Q14135 290 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 NEDD9Q14511 834 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 DRAP1Q14919 205 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 LONRF2Q1L5Z9 754 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 GLIPR1L2Q4G1C9 344 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CBWD6Q4V339 395 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 TDRD12Q587J7 1177 aaKnown RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 DCAF17Q5H9S7 520 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CBWD3Q5JTY5 395 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CBWD5Q5RIA9 395 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 UTP14CQ5TAP6 766 aaKnown RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PHLDB3Q6NSJ2 640 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 GPR153Q6NV75 609 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SWSAP1Q6NVH7 229 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 KCNV1Q6PIU1 500 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CCNI2Q6ZMN8 369 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 HDXQ7Z353 690 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 LRRC57Q8N9N7 239 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 SPATA4Q8NEY3 305 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 OLIG1Q8TAK6 271 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PARD3BQ8TEW8 1205 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PBKQ96KB5 322 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CEP170P1Q96L14 293 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 FAM81BQ96LP2 452 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CEP89Q96ST8 783 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 OSBPL9Q96SU4 736 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PNKPQ96T60 521 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CBWD1Q9BRT8 395 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 GPR88Q9GZN0 384 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 VIPAS39Q9H9C1 493 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 KIAA1586Q9HCI6 787 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 ABCB6Q9NP58 842 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 KMT5AQ9NQR1 393 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CYP26B1Q9NR63 512 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 NRBP2Q9NSY0 501 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 ARHGAP28Q9P2N2 729 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 AJAP1Q9UKB5 411 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-213ENST00000569687 STXBP5LQ9Y2K9 1186 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CSADQ9Y600 493 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 CAPN6Q9Y6Q1 641 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 PAPPA2Q9BXP8 1791 aa5.84□□□□□ -1.47
SF3B3-213ENST00000569687 LOXHD1Q8IVV2 1947 aa5.84□□□□□ -1.48
SF3B3-213ENST00000569687 DOCK1Q14185 1865 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 RBBP6Q7Z6E9 1792 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 EMSYQ7Z589 1322 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 IGSF9BQ9UPX0 1349 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 GSTTP1A0A1W2PQM5 241 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 DENND3A2RUS2 1198 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms