RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 RILPL2Q969X0 211 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 NXPE3Q969Y0 559 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 RPS6KC1Q96S38 1066 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 IWS1Q96ST2 819 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 TMPRSS13Q9BYE2 586 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 NKX2-4Q9H2Z4 354 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 TOMM22Q9NS69 142 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 MAD2L2Q9UI95 211 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 DDX41Q9UJV9 622 aaKnown RBP7.09□□□□□ -1.27
LINC00556-201ENST00000569603 TPX2Q9ULW0 747 aaKnown RBP7.09□□□□□ -1.27
LINC00556-201ENST00000569603 VPS13AQ96RL7 3174 aa7.09□□□□□ -1.27
LINC00556-201ENST00000569603 COL4A4P53420 1690 aaPredicted RBP7.09□□□□□ -1.27
LINC00556-201ENST00000569603 LOC100289279A0A1B0GTE1 492 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 EREGO14944 169 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 CYTH3O43739 400 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 LPXNO60711 386 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 TIAF1O95411 115 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 F2P00734 622 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 CXCL10P02778 98 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 MYL3P08590 195 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 SUPT20HL2P0C7V6 817 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 RFC2P35250 354 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 EIF1AXP47813 144 aaKnown RBP7.08□□□□□ -1.28
LINC00556-201ENST00000569603 SP2Q02086 613 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 TROAPQ12815 778 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 LY6KQ17RY6 165 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 PLEKHG6Q3KR16 790 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 USH1GQ495M9 461 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 CCDC178Q5BJE1 867 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
LINC00556-201ENST00000569603 TTC22Q5TAA0 569 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 NFXL1Q6ZNB6 911 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 SPRED2Q7Z698 418 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 VSIG10LQ86VR7 867 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 IQCA1Q86XH1 822 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 RPUSD2Q8IZ73 545 aaKnown RBP7.08□□□□□ -1.28
LINC00556-201ENST00000569603 ABI1Q8IZP0 508 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 FBXL6Q8N531 539 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 IL31RAQ8NI17 732 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
LINC00556-201ENST00000569603 RMDN3Q96TC7 470 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 OSMRQ99650 979 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 PDCD2LQ9BRP1 358 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 USP26Q9BXU7 913 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 RIOX1Q9H6W3 641 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 PXMP2Q9NR77 195 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 SH3BP1Q9Y3L3 701 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 SIP14410 1827 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 ZDBF2Q9HCK1 2354 aa7.08□□□□□ -1.28
LINC00556-201ENST00000569603 USP34Q70CQ2 3546 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ATG2AQ2TAZ0 1938 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 RAD50Q92878 1312 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 COL4A6Q14031 1691 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 CCDC189A1A4V9 331 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 CFAP69A5D8W1 941 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 HIP1O00291 1037 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 DHX16O60231 1041 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 NBNO60934 754 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 GH1P01241 217 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 CYP21A2P08686 494 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 PARP1P09874 1014 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ATP2A2P16615 1042 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 CHMLP26374 656 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ARL4DP49703 201 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 TBX4P57082 545 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ANTXR2P58335 489 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 PTH1RQ03431 593 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 TAP1Q03518 808 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 IKBKEQ14164 716 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 GRM4Q14833 912 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 STXBP2Q15833 593 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 GET4Q7L5D6 327 aaPredicted RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 PCGF5Q86SE9 256 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 PPTC7Q8NI37 304 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 PHOSPHO2Q8TCD6 241 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 AFAP1L1Q8TED9 768 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ATXN2LQ8WWM7 1075 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ASB2Q96Q27 587 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 C16orf70Q9BSU1 422 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 KRT23Q9C075 422 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 MTIF3Q9H2K0 278 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 KAT14Q9H8E8 782 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 CNNM2Q9H8M5 875 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 MAP3K20Q9NYL2 800 aaKnown RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 GTF2IRD1Q9UHL9 959 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 FEZ2Q9UHY8 353 aaPredicted RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 CTNNA3Q9UI47 895 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 MSRAQ9UJ68 235 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 COL4A3BPQ9Y5P4 624 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 MTCH2Q9Y6C9 303 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ZNF318Q5VUA4 2279 aa7.07□□□□□ -1.28
LINC00556-201ENST00000569603 ARID1BQ8NFD5 2236 aaPredicted RBP7.07□□□□□ -1.28
LINC00556-201ENST00000569603 KAT6AQ92794 2004 aa7.06□□□□□ -1.28
LINC00556-201ENST00000569603 MYO15AQ9UKN7 3530 aa7.06□□□□□ -1.28
LINC00556-201ENST00000569603 DMDP11532 3685 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms