RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 POU5F1BQ06416 359 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 CETN1Q12798 172 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 LRMPQ12912 555 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 TRIM32Q13049 653 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 MFSD10Q14728 455 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 ARID5BQ14865 1188 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 MTFR1Q15390 333 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 GRIK4Q16099 956 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 FSCN1Q16658 493 aaKnown RBP8.33□□□□□ -1.08
CDH13-214ENST00000569455 MAPK6Q16659 721 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 PTPN21Q16825 1174 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 CDCA2Q69YH5 1023 aaPredicted RBP8.33□□□□□ -1.08
CDH13-214ENST00000569455 MTHFD1LQ6UB35 978 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 RHPN2Q8IUC4 686 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 GPD1LQ8N335 351 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 LRRC71Q8N4P6 559 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 TC2NQ8N9U0 490 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 PCSK9Q8NBP7 692 aaKnown RBP8.33□□□□□ -1.08
CDH13-214ENST00000569455 RNF149Q8NC42 400 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 NEK11Q8NG66 645 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 CPLX3Q8WVH0 158 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 TRAPPC12Q8WVT3 735 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 POMGNT1Q8WZA1 660 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 DEFB118Q96PH6 123 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 BAG1Q99933 345 aaPredicted RBP8.33□□□□□ -1.08
CDH13-214ENST00000569455 CBWD1Q9BRT8 395 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 MRPL4Q9BYD3 311 aaKnown RBP8.33□□□□□ -1.08
CDH13-214ENST00000569455 EDEM3Q9BZQ6 932 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 UPF3AQ9H1J1 476 aaKnown RBP8.33□□□□□ -1.08
CDH13-214ENST00000569455 PCIF1Q9H4Z3 704 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 MMRN2Q9H8L6 949 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 CAPN11Q9UMQ6 739 aa8.33□□□□□ -1.08
CDH13-214ENST00000569455 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 CCP110O43303 1012 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 CABYRO75952 493 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 LDHAP00338 332 aaKnown RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 SRGAP2CP0DJJ0 459 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 GNAT1P11488 350 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 COL9A1P20849 921 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 KRT9P35527 623 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 MATR3P43243 847 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDH13-214ENST00000569455 CLCN3P51790 818 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 VAMP7P51809 220 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 ADKP55263 362 aaKnown RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 ZBED6P86452 979 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 CCZ1BP86790 482 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 CCZ1P86791 482 aaPredicted RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 ENPEPQ07075 957 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 BFSP1Q12934 665 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 DRP2Q13474 957 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 KIAA0753Q2KHM9 967 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 GBP6Q6ZN66 633 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 TAS1R3Q7RTX0 852 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 CACNA2D4Q7Z3S7 1137 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 LINC01465Q8N7H1 131 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 OR8K1Q8NGG5 319 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 KIAA1524Q8TCG1 905 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 SLC35C1Q96A29 364 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 BORCS6Q96GS4 357 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 NLRP4Q96MN2 994 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 NFKBIZQ9BYH8 718 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 NUCKS1Q9H1E3 243 aaKnown RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 IKZF4Q9H2S9 585 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 PRMT7Q9NVM4 692 aaPredicted RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 MTMR10Q9NXD2 777 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.32□□□□□ -1.08
CDH13-214ENST00000569455 AKT3Q9Y243 479 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 SIK3Q9Y2K2 1263 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
CDH13-214ENST00000569455 SMIM35A0A1B0GVV1 85 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 TTC26A0AVF1 554 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 ZNF233A6NK53 670 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 TISP43B9A030 160 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 INO80B-WBP1J3KQ70 363 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 HAS3O00219 553 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 ACKR2O00590 384 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 P4HA2O15460 535 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 EXTL3O43909 919 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 ZNF500O60304 480 aaPredicted RBP8.31□□□□□ -1.08
CDH13-214ENST00000569455 ADAMTS4O75173 837 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 TOM1L1O75674 476 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 PRKCBP05771 671 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 ADSSP30520 456 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 FMO5P49326 533 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 PTENP60484 403 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 PURAQ00577 322 aaKnown RBP8.31□□□□□ -1.08
CDH13-214ENST00000569455 BEX3Q00994 111 aa8.31□□□□□ -1.08
CDH13-214ENST00000569455 SNRNP35Q16560 246 aaKnown RBP8.31□□□□□ -1.08
CDH13-214ENST00000569455 EXOC3L4Q17RC7 722 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms