RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 RAD54LQ92698 747 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 CPB2Q96IY4 423 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 CASD1Q96PB1 797 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 FZD8Q9H461 694 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 RSAD1Q9HA92 442 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 KMT5AQ9NQR1 393 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 RNF19AQ9NV58 838 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
CLN6-209ENST00000569336 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
CLN6-209ENST00000569336 FSD2A1L4K1 749 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 B4GALT5O43286 388 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 CUTAO60888 179 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 PLS3P13797 630 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 LIG1P18858 919 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 STAT6P42226 847 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 NPTX2P47972 431 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
CLN6-209ENST00000569336 RAD51AP2Q09MP3 1159 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 STRN3Q13033 797 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 MAPK7Q13164 816 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 SKIV2LQ15477 1246 aaKnown RBP10.81□□□□□ -0.68
CLN6-209ENST00000569336 CCDC85BQ15834 202 aaPredicted RBP10.81□□□□□ -0.68
CLN6-209ENST00000569336 NOMO2Q5JPE7 1267 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 UBXN11Q5T124 520 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 FOXD4L5Q5VV16 416 aaPredicted RBP10.81□□□□□ -0.68
CLN6-209ENST00000569336 DAW1Q8N136 415 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 KLHL23Q8NBE8 558 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 SPIRE2Q8WWL2 714 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 FOXD4L4Q8WXT5 416 aaPredicted RBP10.81□□□□□ -0.68
CLN6-209ENST00000569336 PPM1EQ8WY54 764 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 LPPQ93052 612 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 EPSTI1Q96J88 318 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 REEP2Q9BRK0 252 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
CLN6-209ENST00000569336 TMEM134Q9H6X4 195 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 CWH43Q9H720 699 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 INPP5FQ9Y2H2 1132 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 IPPQ9Y573 584 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 TSC2P49815 1807 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 MUC3AQ02505 3323 aa10.81□□□□□ -0.68
CLN6-209ENST00000569336 SCN1AP35498 2009 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 ZC3H11AO75152 810 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLN6-209ENST00000569336 FGF18O76093 207 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 FAM13AO94988 1023 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 NPTXRO95502 500 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 KRT17Q04695 432 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 PKP1Q13835 747 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 MCM6Q14566 821 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 AAK1Q2M2I8 961 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 RRAGBQ5VZM2 374 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 PDE12Q6L8Q7 609 aaKnown RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 KCNT2Q6UVM3 1135 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 FAM193BQ96PV7 902 aaPredicted RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 KIFC3Q9BVG8 833 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 MRPL4Q9BYD3 311 aaKnown RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 CUEDC2Q9H467 287 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 NXF3Q9H4D5 531 aaKnown RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 PDZD7Q9H5P4 517 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 PARVGQ9HBI0 331 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 TLR9Q9NR96 1032 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 BLOC1S4Q9NUP1 217 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 TBC1D13Q9NVG8 400 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 SPG21Q9NZD8 308 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 STK39Q9UEW8 545 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 PUF60Q9UHX1 559 aaKnown RBP10.8□□□□□ -0.68
CLN6-209ENST00000569336 COG5Q9UP83 839 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 PLAGL2Q9UPG8 496 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 LZTS1Q9Y250 596 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 GIT1Q9Y2X7 761 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 HCN4Q9Y3Q4 1203 aa10.8□□□□□ -0.68
CLN6-209ENST00000569336 MYH10P35580 1976 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 GRM6O15303 877 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 INPPL1O15357 1258 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 SLC16A4O15374 487 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 NCK2O43639 380 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 OFD1O75665 1012 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 BRD1O95696 1058 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 ITGB1P05556 798 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 DDIT3P35638 169 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 MLH1P40692 756 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 ME1P48163 572 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 KRT85P78386 507 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 PLCB3Q01970 1234 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 BMS1Q14692 1282 aaKnown RBP10.79□□□□□ -0.68
CLN6-209ENST00000569336 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 LONRF3Q496Y0 759 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 SPECC1Q5M775 1068 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 ATF7IP2Q5U623 682 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 AGMOQ6ZNB7 445 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 LRRC55Q6ZSA7 311 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 SV2BQ7L1I2 683 aa10.79□□□□□ -0.68
CLN6-209ENST00000569336 SMG8Q8ND04 991 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms