RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 EPHB1P54762 984 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SNX30Q5VWJ9 437 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 IKBIPQ70UQ0 350 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CCDC117Q8IWD4 279 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TTC17Q96AE7 1141 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 XAGE2Q96GT9 111 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 UBA2Q9UBT2 640 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SH2B2O14492 632 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TPD52L2O43399 206 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CYP21A2P08686 494 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 THRAP10827 490 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 FAM83BQ5T0W9 1011 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CD109Q6YHK3 1445 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TRIM24O15164 1050 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 KRT1P04264 644 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PYGLP06737 847 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TRIM49P0CI25 452 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TRIM49CP0CI26 452 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 EIF2B2P49770 351 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PRKAA2P54646 552 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 KLHL12Q53G59 568 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CCDC137Q6PK04 289 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 DYMQ7RTS9 669 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SCUBE1Q8IWY4 988 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 GRPEL2Q8TAA5 225 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 AENQ8WTP8 325 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 ABHD8Q96I13 439 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CLIC6Q96NY7 704 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PHF8Q9UPP1 1060 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 HBS1LQ9Y450 684 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 MAST1Q9Y2H9 1570 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 A0A0A6YYK5 440 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TMEM120BA0PK00 339 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 ZNF233A6NK53 670 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 H3BQF6 201 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PPARAQ07869 468 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 NAB2Q15742 525 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TCHHL1Q5QJ38 904 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PPP1R18Q6NYC8 613 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 FRMD5Q7Z6J6 570 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PALB2Q86YC2 1186 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 RBM46Q8TBY0 533 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 DNAJC7Q99615 494 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 BCL10O95999 233 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SLC45A4Q5BKX6 768 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CCNJLQ8IV13 435 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 RHOT1Q8IXI2 618 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SVOPQ8N4V2 548 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 ACCSQ96QU6 501 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 WDR11Q9BZH6 1224 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TUBGCP4Q9UGJ1 667 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 ADAMTS1Q9UHI8 967 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 EIF4G3O43432 1585 aaKnown RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 MED26O95402 600 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 CNTFP26441 200 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 RECQLP46063 649 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-216ENST00000569240 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 NFRKBQ6P4R8 1299 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TATDN2Q93075 761 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 VPS54Q9P1Q0 977 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 WHRNQ9P202 907 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 TAGLN3Q9UI15 199 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 ADAM30Q9UKF2 790 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 AP3M1Q9Y2T2 418 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SHOX2O60902 331 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 HSD17B3P37058 310 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 IL12RB1P42701 662 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 TOP3AQ13472 1001 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 UGP2Q16851 508 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ARMC3Q5W041 872 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 NELFCDQ8IXH7 590 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 BBS5Q8N3I7 341 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 FAM133AQ8N9E0 248 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 MCRS1Q96EZ8 462 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 OTUD5Q96G74 571 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ZWILCHQ9H900 591 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 A6NJR5 290 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 CFLARO15519 480 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 KATNA1O75449 491 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 RPS6KC1Q96S38 1066 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 FAM153AQ9UHL3 310 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 MEIS1O00470 390 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ANGPT2O15123 496 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 AP1G2O75843 785 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 CXCR5P32302 372 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 OCRLQ01968 901 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 BBS9Q3SYG4 887 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 EFHC1Q5JVL4 640 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 TPH2Q8IWU9 490 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 DEPDC1BQ8WUY9 529 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 WDR12Q9GZL7 423 aaKnown RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 GCNT4Q9P109 453 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 DMTF1Q9Y222 760 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 PTPN22Q9Y2R2 807 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ATP7BP35670 1465 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms