RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GBP3Q9H0R5 595 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 CUEDC2Q9H467 287 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 NXF3Q9H4D5 531 aaKnown RBP14.09□□□□□ -0.15
CDT1-203ENST00000569140 PDZD7Q9H5P4 517 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 RSAD1Q9HA92 442 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 TBC1D7Q9P0N9 293 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 ANKFY1Q9P2R3 1169 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 HCSTQ9UBK5 93 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 PARP2Q9UGN5 583 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
CDT1-203ENST00000569140 RWDD3Q9Y3V2 267 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 COL4A4P53420 1690 aaPredicted RBP14.09□□□□□ -0.15
CDT1-203ENST00000569140 LAMA3Q16787 3333 aa14.09□□□□□ -0.15
CDT1-203ENST00000569140 LAMA2P24043 3122 aaKnown RBP14.09□□□□□ -0.15
CDT1-203ENST00000569140 NLRC5Q86WI3 1866 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 COL4A6Q14031 1691 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 A0A1B0GUA9 196 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 MEIS3P2A8K0S8 358 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 EDN1P05305 212 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 CMA1P23946 247 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 AFMP43652 599 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 AMPD3Q01432 767 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 E2F4Q16254 413 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 ZNF568Q3ZCX4 644 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 ADALQ6DHV7 355 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 HAUS6Q7Z4H7 955 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 ZBTB33Q86T24 672 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 ZNF598Q86UK7 904 aaKnown RBP14.08□□□□□ -0.16
CDT1-203ENST00000569140 CRIPAKQ8N1N5 446 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 FSIP1Q8NA03 581 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 SMG8Q8ND04 991 aaKnown RBP14.08□□□□□ -0.16
CDT1-203ENST00000569140 TMEM161BQ8NDZ6 487 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 PPM1EQ8WY54 764 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 CASD1Q96PB1 797 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 TCHPQ9BT92 498 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 TRAIPQ9BWF2 469 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 MRPL9Q9BYD2 267 aaKnown RBP14.08□□□□□ -0.16
CDT1-203ENST00000569140 TNMDQ9H2S6 317 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 MRPL44Q9H9J2 332 aaKnown RBP14.08□□□□□ -0.16
CDT1-203ENST00000569140 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 RNF19AQ9NV58 838 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 TYW1Q9NV66 732 aaKnown RBP14.08□□□□□ -0.16
CDT1-203ENST00000569140 PANK4Q9NVE7 773 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 CHMP5Q9NZZ3 219 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 ARHGAP28Q9P2N2 729 aa14.08□□□□□ -0.16
CDT1-203ENST00000569140 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
CDT1-203ENST00000569140 KIAA1671Q9BY89 1806 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 MAPTP10636 758 aaKnown RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 AKAP5P24588 427 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 NMT1P30419 496 aaKnown RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 MLH1P40692 756 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 SYKP43405 635 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 ZNF131P52739 623 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 NCKAP1LP55160 1127 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 GPM6BQ13491 265 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 DCAF4L1Q3SXM0 396 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 HERC4Q5GLZ8 1057 aaPredicted RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 NT5DC1Q5TFE4 455 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 EEF1DP3Q658K8 133 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 CCDC65Q8IXS2 484 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 TARS2Q9BW92 718 aaKnown RBP14.07□□□□□ -0.16
CDT1-203ENST00000569140 BLZF1Q9H2G9 400 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 MAGEF1Q9HAY2 307 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 KLK14Q9P0G3 267 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 GDAQ9Y2T3 454 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 PCDHB12Q9Y5F1 795 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 RALGAPA2Q2PPJ7 1873 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 TCHHQ07283 1943 aa14.07□□□□□ -0.16
CDT1-203ENST00000569140 ZNF623O75123 536 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDT1-203ENST00000569140 GCNT3O95395 438 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 POMCP01189 267 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 GAP43P17677 238 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 LAG3P18627 525 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 BMPR1AP36894 532 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 LIG4P49917 911 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 NOMO2Q5JPE7 1267 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 AGMOQ6ZNB7 445 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 TAS1R3Q7RTX0 852 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 MRPL10Q7Z7H8 261 aaKnown RBP14.06□□□□□ -0.16
CDT1-203ENST00000569140 GRAMD1CQ8IYS0 662 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 DNAJC19Q96DA6 116 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 ACO2Q99798 780 aaKnown RBP14.06□□□□□ -0.16
CDT1-203ENST00000569140 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
CDT1-203ENST00000569140 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 UBN1Q9NPG3 1134 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
CDT1-203ENST00000569140 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
CDT1-203ENST00000569140 HNRNPDLO14979 420 aaKnown RBP14.05□□□□□ -0.16
CDT1-203ENST00000569140 OFD1O75665 1012 aa14.05□□□□□ -0.16
CDT1-203ENST00000569140 CASP1P29466 404 aa14.05□□□□□ -0.16
CDT1-203ENST00000569140 PBX3P40426 434 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms