RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 CTSHP09668 335 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 CKBP12277 381 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 DARSP14868 501 aaKnown RBP11.47□□□□□ -0.57
CDH3-210ENST00000569117 THPOP40225 353 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 PRCPP42785 496 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 FAAP100Q0VG06 881 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 BFSP2Q13515 415 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 STIM1Q13586 685 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 PCBP1Q15365 356 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDH3-210ENST00000569117 MAPK6Q16659 721 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 FAM187BQ17R55 369 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 ZC2HC1CQ53FD0 456 aaPredicted RBP11.47□□□□□ -0.57
CDH3-210ENST00000569117 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 TAS1R3Q7RTX0 852 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 SRGAP1Q7Z6B7 1085 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 ADSSL1Q8N142 457 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 TMEM40Q8WWA1 233 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 ZNF668Q96K58 619 aaPredicted RBP11.47□□□□□ -0.57
CDH3-210ENST00000569117 PRIMPOLQ96LW4 560 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 PPP1R16BQ96T49 567 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 OSMRQ99650 979 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 ANP32EQ9BTT0 268 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 NOC4LQ9BVI4 516 aaKnown RBP11.47□□□□□ -0.57
CDH3-210ENST00000569117 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
CDH3-210ENST00000569117 MINDY3Q9H8M7 445 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 TBX20Q9UMR3 447 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 ATP11BQ9Y2G3 1177 aa11.47□□□□□ -0.57
CDH3-210ENST00000569117 MKI67P46013 3256 aaKnown RBP11.46□□□□□ -0.57
CDH3-210ENST00000569117 CNTNAP2Q9UHC6 1331 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 PSMA7O14818 248 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 HOXA2O43364 376 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 PIGRP01833 764 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 CHRNA1P02708 482 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 EDN1P05305 212 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 PRKCBP05771 671 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 CLTBP09497 229 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 SELPP16109 830 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDH3-210ENST00000569117 EIF4BP23588 611 aaKnown RBP11.46□□□□□ -0.57
CDH3-210ENST00000569117 STRN3Q13033 797 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.57
CDH3-210ENST00000569117 ZNF618Q5T7W0 954 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 FOXR2Q6PJQ5 311 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 LRSAM1Q6UWE0 723 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 LRRC8DQ7L1W4 858 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 TNS4Q8IZW8 715 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 DHTKD1Q96HY7 919 aaPredicted RBP11.46□□□□□ -0.57
CDH3-210ENST00000569117 ACCSQ96QU6 501 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
CDH3-210ENST00000569117 KCTD10Q9H3F6 313 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 FZD8Q9H461 694 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 TMEM206Q9H813 350 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 PRMT7Q9NVM4 692 aaPredicted RBP11.46□□□□□ -0.57
CDH3-210ENST00000569117 EXOC7Q9UPT5 735 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 MAPK8IP1Q9UQF2 711 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 GINS2Q9Y248 185 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 SCN5AQ14524 2016 aa11.46□□□□□ -0.57
CDH3-210ENST00000569117 INO80B-WBP1J3KQ70 363 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 K7ERI5 159 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 ACKR2O00590 384 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 HNRNPDLO14979 420 aaKnown RBP11.45□□□□□ -0.58
CDH3-210ENST00000569117 GPR37L1O60883 481 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 PRPF6O94906 941 aaKnown RBP11.45□□□□□ -0.58
CDH3-210ENST00000569117 HOXD13P35453 343 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 GCGRP47871 477 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 VAC14Q08AM6 782 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 PAK1Q13153 545 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 KNOP1Q1ED39 458 aaKnown RBP11.45□□□□□ -0.58
CDH3-210ENST00000569117 ZCWPW2Q504Y3 356 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 FBXO47Q5MNV8 452 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 CENPPQ6IPU0 288 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 ZPBP2Q6X784 338 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
CDH3-210ENST00000569117 USP38Q8NB14 1042 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 DNAJC25Q9H1X3 360 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 HIPK3Q9H422 1215 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
CDH3-210ENST00000569117 PCDHGC3Q9UN70 934 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 LHX6Q9UPM6 363 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 SQORQ9Y6N5 450 aa11.45□□□□□ -0.58
CDH3-210ENST00000569117 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 UMODL1Q5DID0 1318 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 PDXKO00764 312 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 KIAA0355O15063 1070 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 TSPAN1O60635 241 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 ERLIN2O94905 339 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 PARNO95453 639 aaKnown RBP11.44□□□□□ -0.58
CDH3-210ENST00000569117 CAVIN2O95810 425 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 IQCF3P0C7M6 154 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 CCNE1P24864 410 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 ERCC5P28715 1186 aaPredicted RBP11.44□□□□□ -0.58
CDH3-210ENST00000569117 SNRPFP62306 86 aaKnown RBP11.44□□□□□ -0.58
CDH3-210ENST00000569117 LRRC63Q05C16 580 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 LPIN1Q14693 890 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 MBTPS1Q14703 1052 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 ANO6Q4KMQ2 910 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms